EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0019978 (Gene tree)
Gene ID: -
Gene Symbol: Pum2
Alias: 5730503J23Rik|Kiaa0235|Pumm2
Full Name: pumilio RNA-binding family member 2
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 82328 bases
Position: chr12:5919745-6002072
Accession: 1931751
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0034845	PUF	PF00806.19	1.5e-73	1	8
MGP_C57BL6NJ_P0034845	PUF	PF00806.19	1.5e-73	2	8
MGP_C57BL6NJ_P0034845	PUF	PF00806.19	1.5e-73	3	8
MGP_C57BL6NJ_P0034845	PUF	PF00806.19	1.5e-73	4	8
MGP_C57BL6NJ_P0034845	PUF	PF00806.19	1.5e-73	5	8
MGP_C57BL6NJ_P0034845	PUF	PF00806.19	1.5e-73	6	8
MGP_C57BL6NJ_P0034845	PUF	PF00806.19	1.5e-73	7	8
MGP_C57BL6NJ_P0034845	PUF	PF00806.19	1.5e-73	8	8
MGP_C57BL6NJ_P0034843	PUF	PF00806.19	1.5e-73	1	8
MGP_C57BL6NJ_P0034843	PUF	PF00806.19	1.5e-73	2	8
MGP_C57BL6NJ_P0034843	PUF	PF00806.19	1.5e-73	3	8
MGP_C57BL6NJ_P0034843	PUF	PF00806.19	1.5e-73	4	8
MGP_C57BL6NJ_P0034843	PUF	PF00806.19	1.5e-73	5	8
MGP_C57BL6NJ_P0034843	PUF	PF00806.19	1.5e-73	6	8
MGP_C57BL6NJ_P0034843	PUF	PF00806.19	1.5e-73	7	8
MGP_C57BL6NJ_P0034843	PUF	PF00806.19	1.5e-73	8	8
MGP_C57BL6NJ_P0034851	PUF	PF00806.19	1.5e-73	1	8
MGP_C57BL6NJ_P0034851	PUF	PF00806.19	1.5e-73	2	8
MGP_C57BL6NJ_P0034851	PUF	PF00806.19	1.5e-73	3	8
MGP_C57BL6NJ_P0034851	PUF	PF00806.19	1.5e-73	4	8
MGP_C57BL6NJ_P0034851	PUF	PF00806.19	1.5e-73	5	8
MGP_C57BL6NJ_P0034851	PUF	PF00806.19	1.5e-73	6	8
MGP_C57BL6NJ_P0034851	PUF	PF00806.19	1.5e-73	7	8
MGP_C57BL6NJ_P0034851	PUF	PF00806.19	1.5e-73	8	8
MGP_C57BL6NJ_P0034844	PUF	PF00806.19	3.1e-73	1	8
MGP_C57BL6NJ_P0034844	PUF	PF00806.19	3.1e-73	2	8
MGP_C57BL6NJ_P0034844	PUF	PF00806.19	3.1e-73	3	8
MGP_C57BL6NJ_P0034844	PUF	PF00806.19	3.1e-73	4	8
MGP_C57BL6NJ_P0034844	PUF	PF00806.19	3.1e-73	5	8
MGP_C57BL6NJ_P0034844	PUF	PF00806.19	3.1e-73	6	8
MGP_C57BL6NJ_P0034844	PUF	PF00806.19	3.1e-73	7	8
MGP_C57BL6NJ_P0034844	PUF	PF00806.19	3.1e-73	8	8
MGP_C57BL6NJ_P0034846	PUF	PF00806.19	3.1e-73	1	8
MGP_C57BL6NJ_P0034846	PUF	PF00806.19	3.1e-73	2	8
MGP_C57BL6NJ_P0034846	PUF	PF00806.19	3.1e-73	3	8
MGP_C57BL6NJ_P0034846	PUF	PF00806.19	3.1e-73	4	8
MGP_C57BL6NJ_P0034846	PUF	PF00806.19	3.1e-73	5	8
MGP_C57BL6NJ_P0034846	PUF	PF00806.19	3.1e-73	6	8
MGP_C57BL6NJ_P0034846	PUF	PF00806.19	3.1e-73	7	8
MGP_C57BL6NJ_P0034846	PUF	PF00806.19	3.1e-73	8	8
MGP_C57BL6NJ_P0034850	PUF	PF00806.19	1.4e-72	1	8
MGP_C57BL6NJ_P0034850	PUF	PF00806.19	1.4e-72	2	8
MGP_C57BL6NJ_P0034850	PUF	PF00806.19	1.4e-72	3	8
MGP_C57BL6NJ_P0034850	PUF	PF00806.19	1.4e-72	4	8
MGP_C57BL6NJ_P0034850	PUF	PF00806.19	1.4e-72	5	8
MGP_C57BL6NJ_P0034850	PUF	PF00806.19	1.4e-72	6	8
MGP_C57BL6NJ_P0034850	PUF	PF00806.19	1.4e-72	7	8
MGP_C57BL6NJ_P0034850	PUF	PF00806.19	1.4e-72	8	8
MGP_C57BL6NJ_P0034852	PUF	PF00806.19	1.4e-72	1	8
MGP_C57BL6NJ_P0034852	PUF	PF00806.19	1.4e-72	2	8
MGP_C57BL6NJ_P0034852	PUF	PF00806.19	1.4e-72	3	8
MGP_C57BL6NJ_P0034852	PUF	PF00806.19	1.4e-72	4	8
MGP_C57BL6NJ_P0034852	PUF	PF00806.19	1.4e-72	5	8
MGP_C57BL6NJ_P0034852	PUF	PF00806.19	1.4e-72	6	8
MGP_C57BL6NJ_P0034852	PUF	PF00806.19	1.4e-72	7	8
MGP_C57BL6NJ_P0034852	PUF	PF00806.19	1.4e-72	8	8
MGP_C57BL6NJ_P0034858	PUF	PF00806.19	4.1e-40	1	4
MGP_C57BL6NJ_P0034858	PUF	PF00806.19	4.1e-40	2	4
MGP_C57BL6NJ_P0034858	PUF	PF00806.19	4.1e-40	3	4
MGP_C57BL6NJ_P0034858	PUF	PF00806.19	4.1e-40	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0034851	-	3333	-	MGP_C57BL6NJ_P0034851	985 (aa)	-	-
MGP_C57BL6NJ_T0034859	-	612	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0034854	-	648	-	MGP_C57BL6NJ_P0034854	185 (aa)	-	-
MGP_C57BL6NJ_T0034857	-	706	-	MGP_C57BL6NJ_P0034857	234 (aa)	-	-
MGP_C57BL6NJ_T0034855	-	472	-	MGP_C57BL6NJ_P0034855	109 (aa)	-	-
MGP_C57BL6NJ_T0034858	-	665	-	MGP_C57BL6NJ_P0034858	221 (aa)	-	-
MGP_C57BL6NJ_T0034850	-	3560	-	MGP_C57BL6NJ_P0034850	1066 (aa)	-	-
MGP_C57BL6NJ_T0034849	-	6108	-	MGP_C57BL6NJ_P0034849	929 (aa)	-	-
MGP_C57BL6NJ_T0034848	-	6218	-	MGP_C57BL6NJ_P0034848	35 (aa)	-	-
MGP_C57BL6NJ_T0034847	-	518	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0034846	-	6349	-	MGP_C57BL6NJ_P0034846	1064 (aa)	-	-
MGP_C57BL6NJ_T0034845	-	3625	-	MGP_C57BL6NJ_P0034845	980 (aa)	-	-
MGP_C57BL6NJ_T0034844	-	5022	-	MGP_C57BL6NJ_P0034844	1064 (aa)	-	-
MGP_C57BL6NJ_T0034843	-	5912	XM_006515277	MGP_C57BL6NJ_P0034843	985 (aa)	XP_006515340	Q80U58
MGP_C57BL6NJ_T0034852	-	6264	-	MGP_C57BL6NJ_P0034852	1066 (aa)	-	-
MGP_C57BL6NJ_T0034856	-	994	-	MGP_C57BL6NJ_P0034856	35 (aa)	-	-
MGP_C57BL6NJ_T0034853	-	902	-	MGP_C57BL6NJ_P0034853	262 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0019978's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0019978's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0019978	Pum2	100	88.835	MGP_C57BL6NJ_G0029277	Pum1	86	87.294