EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0020103 (Gene tree)
Gene ID: -
Gene Symbol: Nova1
Alias: 9430099M15Rik|G630039L02|Nova-1
Full Name: neuro-oncological ventral antigen 1
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 137776 bases
Position: chr12:46648176-46785951
Accession: 104297
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0035202	KH_1	PF00013.29	3.2e-46	1	3
MGP_C57BL6NJ_P0035202	KH_1	PF00013.29	3.2e-46	2	3
MGP_C57BL6NJ_P0035202	KH_1	PF00013.29	3.2e-46	3	3
MGP_C57BL6NJ_P0035202	KH_2	PF07650.17	1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0035202	-	7000	-	MGP_C57BL6NJ_P0035202	507 (aa)	XP_006516214	Q9JKN6

Gene Model

Click here to download MGP_C57BL6NJ_G0020103's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0020103's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0020103	Nova1	59	40.351	MGP_C57BL6NJ_G0017785	Pcbp3	72	40.351
MGP_C57BL6NJ_G0020103	Nova1	57	40.541	MGP_C57BL6NJ_G0031414	Pcbp1	70	40.541
MGP_C57BL6NJ_G0020103	Nova1	64	73.333	MGP_C57BL6NJ_G0032195	-	92	67.041
MGP_C57BL6NJ_G0020103	Nova1	52	38.462	MGP_C57BL6NJ_G0035725	-	51	38.462
MGP_C57BL6NJ_G0020103	Nova1	53	39.726	MGP_C57BL6NJ_G0022830	Pcbp2	69	39.726
MGP_C57BL6NJ_G0020103	Nova1	64	73.333	MGP_C57BL6NJ_G0032196	Nova2	100	67.816
MGP_C57BL6NJ_G0020103	Nova1	56	39.062	MGP_C57BL6NJ_G0021017	Hnrnpk	56	39.062
MGP_C57BL6NJ_G0020103	Nova1	57	36.364	MGP_C57BL6NJ_G0028402	Fubp1	50	36.364