EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0020274 (Gene tree)
Gene ID: -
Gene Symbol: Zfp36l1
Alias: AW742437|AW743212|Berg36|Brf1|D530020L18Rik|ERF1|TIS11b|Tis11b|cMG1
Full Name: zinc finger protein 36%2C C3H type-like 1
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 5269 bases
Position: chr12:82808495-82813763
Accession: 107946
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0035639	zf-CCCH	PF00642.24	2.7e-22	1	2
MGP_C57BL6NJ_P0035639	zf-CCCH	PF00642.24	2.7e-22	2	2
MGP_C57BL6NJ_P0035640	zf-CCCH	PF00642.24	2.7e-22	1	2
MGP_C57BL6NJ_P0035640	zf-CCCH	PF00642.24	2.7e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0035640	-	2039	-	MGP_C57BL6NJ_P0035640	338 (aa)	-	-
MGP_C57BL6NJ_T0035639	-	2999	-	MGP_C57BL6NJ_P0035639	338 (aa)	-	P23950

Gene Model

Click here to download MGP_C57BL6NJ_G0020274's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0020274's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0020274	Zfp36l1	80	65.079	MGP_C57BL6NJ_G0024482	Zfp36l2	100	42.626