EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0020284 (Gene tree)
Gene ID: -
Gene Symbol: Srsf5
Alias: Hrs|Sfrs5
Full Name: serine/arginine-rich splicing factor 5
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 5004 bases
Position: chr12:83745565-83750568
Accession: 98287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0035656	RRM_1	PF00076.22	1.7e-30	1	2
MGP_C57BL6NJ_P0035656	RRM_1	PF00076.22	1.7e-30	2	2
MGP_C57BL6NJ_P0035661	RRM_1	PF00076.22	1.7e-30	1	2
MGP_C57BL6NJ_P0035661	RRM_1	PF00076.22	1.7e-30	2	2
MGP_C57BL6NJ_P0035666	RRM_1	PF00076.22	1.7e-30	1	2
MGP_C57BL6NJ_P0035666	RRM_1	PF00076.22	1.7e-30	2	2
MGP_C57BL6NJ_P0035658	RRM_1	PF00076.22	1.7e-30	1	2
MGP_C57BL6NJ_P0035658	RRM_1	PF00076.22	1.7e-30	2	2
MGP_C57BL6NJ_P0035660	RRM_1	PF00076.22	1.7e-30	1	2
MGP_C57BL6NJ_P0035660	RRM_1	PF00076.22	1.7e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0035659	-	2720	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0035658	-	1510	-	MGP_C57BL6NJ_P0035658	270 (aa)	-	-
MGP_C57BL6NJ_T0035657	-	2940	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0035656	-	1527	XM_006515629	MGP_C57BL6NJ_P0035656	269 (aa)	XP_006515692	O35326
MGP_C57BL6NJ_T0035664	-	547	-	MGP_C57BL6NJ_P0035664	46 (aa)	-	-
MGP_C57BL6NJ_T0035665	-	489	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0035666	-	1568	-	MGP_C57BL6NJ_P0035666	269 (aa)	-	-
MGP_C57BL6NJ_T0035667	-	3482	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0035660	-	1498	-	MGP_C57BL6NJ_P0035660	270 (aa)	-	-
MGP_C57BL6NJ_T0035661	-	1491	-	MGP_C57BL6NJ_P0035661	269 (aa)	-	-
MGP_C57BL6NJ_T0035662	-	538	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0035663	-	886	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0020284's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0020284's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0020284	Srsf5	89	63.415	MGP_C57BL6NJ_G0027236	Srsf6	50	71.642
MGP_C57BL6NJ_G0020284	Srsf5	89	48.780	MGP_C57BL6NJ_G0030395	Srsf9	68	39.394
MGP_C57BL6NJ_G0020284	Srsf5	96	51.020	MGP_C57BL6NJ_G0019312	Srsf1	80	46.988