EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_C57BL6NJ_G0020481 (Gene tree)
Gene ID
-
Gene Symbol
Papola
Alias
Pap|PapIII|Plap
Full Name
poly (A) polymerase alpha
Gene Type
protein_coding
Species
Mus_musculus_c57bl6nj
Status
putative
Strand
Plus strand
Length
56334 bases
Position
chr12:110998538-111054871
Accession
109301
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_C57BL6NJ_P0036302PAP_RNA-bindPF04926.151.5e-2511
MGP_C57BL6NJ_P0036297PAP_RNA-bindPF04926.151.1e-2411
MGP_C57BL6NJ_P0036296PAP_RNA-bindPF04926.151.2e-2411
MGP_C57BL6NJ_P0036289PAP_RNA-bindPF04926.151.2e-2411
MGP_C57BL6NJ_P0036301PAP_RNA-bindPF04926.157.6e-2411
MGP_C57BL6NJ_P0036287PAP_RNA-bindPF04926.156.6e-2311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_C57BL6NJ_T0036299-701-MGP_C57BL6NJ_P003629994 (aa)--
MGP_C57BL6NJ_T0036304-686-MGP_C57BL6NJ_P0036304119 (aa)--
MGP_C57BL6NJ_T0036302-966-MGP_C57BL6NJ_P0036302321 (aa)--
MGP_C57BL6NJ_T0036303-581--- (aa)--
MGP_C57BL6NJ_T0036300-295--- (aa)--
MGP_C57BL6NJ_T0036301-1508-MGP_C57BL6NJ_P0036301418 (aa)--
MGP_C57BL6NJ_T0036298-1170--- (aa)--
MGP_C57BL6NJ_T0036290-2076--- (aa)--
MGP_C57BL6NJ_T0036289-2544-MGP_C57BL6NJ_P0036289693 (aa)--
MGP_C57BL6NJ_T0036288-726--- (aa)--
MGP_C57BL6NJ_T0036287-2436XM_006515592MGP_C57BL6NJ_P0036287732 (aa)XP_006515655Q61183
MGP_C57BL6NJ_T0036291-2223-MGP_C57BL6NJ_P0036291111 (aa)--
MGP_C57BL6NJ_T0036292-809--- (aa)--
MGP_C57BL6NJ_T0036293-4356-MGP_C57BL6NJ_P0036293168 (aa)--
MGP_C57BL6NJ_T0036294-529-MGP_C57BL6NJ_P003629466 (aa)--
MGP_C57BL6NJ_T0036295-1033-MGP_C57BL6NJ_P0036295293 (aa)--
MGP_C57BL6NJ_T0036296-2605-MGP_C57BL6NJ_P0036296718 (aa)--
MGP_C57BL6NJ_T0036297-4309-MGP_C57BL6NJ_P0036297739 (aa)--
Gene Model
Click here to download MGP_C57BL6NJ_G0020481's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0020481's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_C57BL6NJ_G0020481Papola9385.848MGP_C57BL6NJ_G0030744Papolb9985.848
MGP_C57BL6NJ_G0020481Papola9861.224MGP_C57BL6NJ_G0018486Papolg9781.884

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