EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0020532 (Gene tree)
Gene ID: -
Gene Symbol: Tdrd9
Alias: 4930441E05Rik
Full Name: tudor domain containing 9
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 93669 bases
Position: chr12:117959174-118052842
Accession: 1921941
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0036469	TUDOR	PF00567.24	6.9e-15	1	1
MGP_C57BL6NJ_P0036469	DEAD	PF00270.29	1.2e-07	1	1
MGP_C57BL6NJ_P0036469	HA2	PF04408.23	2.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0036469	-	4809	XM_006516316	MGP_C57BL6NJ_P0036469	1383 (aa)	XP_006516379	Q14BI7
MGP_C57BL6NJ_T0036475	-	3681	-	MGP_C57BL6NJ_P0036475	216 (aa)	-	-
MGP_C57BL6NJ_T0036476	-	3366	-	MGP_C57BL6NJ_P0036476	539 (aa)	-	-
MGP_C57BL6NJ_T0036477	-	799	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0036478	-	456	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0036479	-	484	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0020532's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0020532's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0020532	Tdrd9	99	34.079	MGP_C57BL6NJ_G0027678	Dhx36	57	34.171
MGP_C57BL6NJ_G0020532	Tdrd9	88	30.081	MGP_C57BL6NJ_G0029974	Dhx15	71	30.081
MGP_C57BL6NJ_G0020532	Tdrd9	89	31.417	MGP_C57BL6NJ_G0019287	Dhx40	58	31.417
MGP_C57BL6NJ_G0020532	Tdrd9	95	33.843	MGP_C57BL6NJ_G0035839	Dhx30	51	32.248
MGP_C57BL6NJ_G0020532	Tdrd9	95	32.448	MGP_C57BL6NJ_G0019012	Dhx33	77	31.000