EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0021017 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpk
Alias: Hnrpk|Hnrpk {ECO:0000313|EMBL:AAH89328.1,GN ECO:0000313|MGI:MGI:99894}|KBBP|NOVA|hnRNPK
Full Name: heterogeneous nuclear ribonucleoprotein K
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 12469 bases
Position: chr13:59813608-59826076
Accession: 99894
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0037696	KH_1	PF00013.29	2.4e-43	1	3
MGP_C57BL6NJ_P0037696	KH_1	PF00013.29	2.4e-43	2	3
MGP_C57BL6NJ_P0037696	KH_1	PF00013.29	2.4e-43	3	3
MGP_C57BL6NJ_P0037694	KH_1	PF00013.29	2.4e-43	1	3
MGP_C57BL6NJ_P0037694	KH_1	PF00013.29	2.4e-43	2	3
MGP_C57BL6NJ_P0037694	KH_1	PF00013.29	2.4e-43	3	3
MGP_C57BL6NJ_P0037695	KH_1	PF00013.29	3e-43	1	3
MGP_C57BL6NJ_P0037695	KH_1	PF00013.29	3e-43	2	3
MGP_C57BL6NJ_P0037695	KH_1	PF00013.29	3e-43	3	3
MGP_C57BL6NJ_P0037692	KH_1	PF00013.29	3e-43	1	3
MGP_C57BL6NJ_P0037692	KH_1	PF00013.29	3e-43	2	3
MGP_C57BL6NJ_P0037692	KH_1	PF00013.29	3e-43	3	3
MGP_C57BL6NJ_P0037693	KH_1	PF00013.29	5.9e-34	1	2
MGP_C57BL6NJ_P0037693	KH_1	PF00013.29	5.9e-34	2	2
MGP_C57BL6NJ_P0037704	KH_1	PF00013.29	1.1e-23	1	2
MGP_C57BL6NJ_P0037704	KH_1	PF00013.29	1.1e-23	2	2
MGP_C57BL6NJ_P0037701	KH_1	PF00013.29	1.6e-23	1	2
MGP_C57BL6NJ_P0037701	KH_1	PF00013.29	1.6e-23	2	2
MGP_C57BL6NJ_P0037707	KH_1	PF00013.29	2.9e-23	1	2
MGP_C57BL6NJ_P0037707	KH_1	PF00013.29	2.9e-23	2	2
MGP_C57BL6NJ_P0037709	KH_1	PF00013.29	3.3e-09	1	1
MGP_C57BL6NJ_P0037711	KH_1	PF00013.29	6.6e-09	1	1
MGP_C57BL6NJ_P0037706	KH_1	PF00013.29	3.5e-05	1	1
MGP_C57BL6NJ_P0037711	KH_2	PF07650.17	0.00011	1	1
MGP_C57BL6NJ_P0037706	KH_2	PF07650.17	0.00024	1	1
MGP_C57BL6NJ_P0037706	ROKNT	PF08067.11	2e-27	1	1
MGP_C57BL6NJ_P0037701	ROKNT	PF08067.11	3.1e-27	1	1
MGP_C57BL6NJ_P0037711	ROKNT	PF08067.11	3.6e-27	1	1
MGP_C57BL6NJ_P0037696	ROKNT	PF08067.11	7.8e-27	1	1
MGP_C57BL6NJ_P0037694	ROKNT	PF08067.11	7.8e-27	1	1
MGP_C57BL6NJ_P0037704	ROKNT	PF08067.11	1.9e-26	1	1
MGP_C57BL6NJ_P0037695	ROKNT	PF08067.11	4e-26	1	1
MGP_C57BL6NJ_P0037692	ROKNT	PF08067.11	4.1e-26	1	1
MGP_C57BL6NJ_P0037707	ROKNT	PF08067.11	1.9e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0037697	-	881	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0037696	-	2660	-	MGP_C57BL6NJ_P0037696	439 (aa)	-	-
MGP_C57BL6NJ_T0037695	-	2683	-	MGP_C57BL6NJ_P0037695	463 (aa)	-	-
MGP_C57BL6NJ_T0037694	-	2633	-	MGP_C57BL6NJ_P0037694	440 (aa)	-	-
MGP_C57BL6NJ_T0037693	-	2802	-	MGP_C57BL6NJ_P0037693	416 (aa)	-	-
MGP_C57BL6NJ_T0037692	-	2977	XM_006517103	MGP_C57BL6NJ_P0037692	464 (aa)	XP_006517166	P61979
MGP_C57BL6NJ_T0037712	-	780	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0037711	-	1053	-	MGP_C57BL6NJ_P0037711	97 (aa)	-	-
MGP_C57BL6NJ_T0037710	-	775	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0037699	-	738	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0037698	-	1387	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0037701	-	1004	-	MGP_C57BL6NJ_P0037701	299 (aa)	-	-
MGP_C57BL6NJ_T0037700	-	817	-	MGP_C57BL6NJ_P0037700	209 (aa)	-	-
MGP_C57BL6NJ_T0037703	-	737	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0037702	-	522	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0037705	-	459	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0037704	-	900	-	MGP_C57BL6NJ_P0037704	256 (aa)	-	-
MGP_C57BL6NJ_T0037707	-	676	-	MGP_C57BL6NJ_P0037707	178 (aa)	-	-
MGP_C57BL6NJ_T0037706	-	723	-	MGP_C57BL6NJ_P0037706	77 (aa)	-	-
MGP_C57BL6NJ_T0037709	-	476	-	MGP_C57BL6NJ_P0037709	87 (aa)	-	-
MGP_C57BL6NJ_T0037708	-	833	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0021017's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0021017's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0021017	Hnrnpk	78	32.414	MGP_C57BL6NJ_G0035725	-	86	33.728
MGP_C57BL6NJ_G0021017	Hnrnpk	78	31.724	MGP_C57BL6NJ_G0031414	Pcbp1	88	40.187
MGP_C57BL6NJ_G0021017	Hnrnpk	56	39.062	MGP_C57BL6NJ_G0020103	Nova1	56	39.062
MGP_C57BL6NJ_G0021017	Hnrnpk	70	51.316	MGP_C57BL6NJ_G0017785	Pcbp3	79	41.667
MGP_C57BL6NJ_G0021017	Hnrnpk	57	34.615	MGP_C57BL6NJ_G0028402	Fubp1	53	35.211
MGP_C57BL6NJ_G0021017	Hnrnpk	100	96.552	MGP_C57BL6NJ_G0032933	-	100	96.552
MGP_C57BL6NJ_G0021017	Hnrnpk	78	31.724	MGP_C57BL6NJ_G0022830	Pcbp2	84	44.444
MGP_C57BL6NJ_G0021017	Hnrnpk	57	37.681	MGP_C57BL6NJ_G0032196	Nova2	54	37.681