EuRBPDB

Description

Ensembl ID: MGP_C57BL6NJ_G0021059 (Gene tree)
Gene ID: -
Gene Symbol: Ercc6l2
Alias: 0610007P08Rik|1700019D06Rik|9330134C04Rik|Rad26l|Sr278
Full Name: excision repair cross-complementing rodent repair deficiency%2C complementation group 6 like 2
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 88753 bases
Position: chr13:65869725-65958477
Accession: 1923501
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0037828	ResIII	PF04851.15	1.8e-11	1	1
MGP_C57BL6NJ_P0037830	ResIII	PF04851.15	2.4e-11	1	1
MGP_C57BL6NJ_P0037827	ResIII	PF04851.15	2.5e-11	1	1
MGP_C57BL6NJ_P0037825	ResIII	PF04851.15	1.2e-10	1	1
MGP_C57BL6NJ_P0037831	ResIII	PF04851.15	1.6e-10	1	1
MGP_C57BL6NJ_P0037824	ResIII	PF04851.15	1e-09	1	1
MGP_C57BL6NJ_P0037828	DEAD	PF00270.29	3.9e-07	1	1
MGP_C57BL6NJ_P0037831	DEAD	PF00270.29	4.5e-07	1	1
MGP_C57BL6NJ_P0037830	DEAD	PF00270.29	5.6e-07	1	1
MGP_C57BL6NJ_P0037827	DEAD	PF00270.29	6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0037833	-	963	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0037832	-	759	-	MGP_C57BL6NJ_P0037832	152 (aa)	-	-
MGP_C57BL6NJ_T0037831	-	1726	-	MGP_C57BL6NJ_P0037831	574 (aa)	-	-
MGP_C57BL6NJ_T0037830	-	2528	-	MGP_C57BL6NJ_P0037830	684 (aa)	-	-
MGP_C57BL6NJ_T0037828	-	1888	-	MGP_C57BL6NJ_P0037828	582 (aa)	-	-
MGP_C57BL6NJ_T0037829	-	1961	-	MGP_C57BL6NJ_P0037829	191 (aa)	-	-
MGP_C57BL6NJ_T0037834	-	2579	-	MGP_C57BL6NJ_P0037834	592 (aa)	-	-
MGP_C57BL6NJ_T0037824	-	1592	-	MGP_C57BL6NJ_P0037824	467 (aa)	-	Q9JIM3
MGP_C57BL6NJ_T0037825	-	3436	-	MGP_C57BL6NJ_P0037825	842 (aa)	-	-
MGP_C57BL6NJ_T0037826	-	1820	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0037827	-	2691	-	MGP_C57BL6NJ_P0037827	699 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0021059	Ercc6l2	81	30.021	MGP_C57BL6NJ_G0028059	Chd1l	50	32.657
MGP_C57BL6NJ_G0021059	Ercc6l2	82	30.353	MGP_C57BL6NJ_G0036182	Smarca1	71	30.174