EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0021087 (Gene tree)
Gene ID: -
Gene Symbol: Rslcan18
Alias: BC038328|Zfp708GN|mszf51
Full Name: regulator of sex-limitation candidate 18
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 19635 bases
Position: chr13:69551644-69571278
Accession: 5433745
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0037889	zf-C2H2	PF00096.26	1.6e-48	1	9
MGP_C57BL6NJ_P0037889	zf-C2H2	PF00096.26	1.6e-48	2	9
MGP_C57BL6NJ_P0037889	zf-C2H2	PF00096.26	1.6e-48	3	9
MGP_C57BL6NJ_P0037889	zf-C2H2	PF00096.26	1.6e-48	4	9
MGP_C57BL6NJ_P0037889	zf-C2H2	PF00096.26	1.6e-48	5	9
MGP_C57BL6NJ_P0037889	zf-C2H2	PF00096.26	1.6e-48	6	9
MGP_C57BL6NJ_P0037889	zf-C2H2	PF00096.26	1.6e-48	7	9
MGP_C57BL6NJ_P0037889	zf-C2H2	PF00096.26	1.6e-48	8	9
MGP_C57BL6NJ_P0037889	zf-C2H2	PF00096.26	1.6e-48	9	9
MGP_C57BL6NJ_P0037889	zf-met	PF12874.7	1.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0037891	-	5245	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0037889	-	2981	-	MGP_C57BL6NJ_P0037889	460 (aa)	-	Q7M6X5

Gene Model

Click here to download MGP_C57BL6NJ_G0021087's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0021087's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0021087	Rslcan18	66	41.304	MGP_C57BL6NJ_G0029473	Zbtb17	56	41.304
MGP_C57BL6NJ_G0021087	Rslcan18	80	47.619	MGP_C57BL6NJ_G0034971	Zfp872	100	50.000
MGP_C57BL6NJ_G0021087	Rslcan18	70	45.283	MGP_C57BL6NJ_G0025014	Zfp236	60	46.591
MGP_C57BL6NJ_G0021087	Rslcan18	66	41.284	MGP_C57BL6NJ_G0019380	Zfp652	51	34.239
MGP_C57BL6NJ_G0021087	Rslcan18	80	58.039	MGP_C57BL6NJ_G0021105	Zfp748	99	58.039
MGP_C57BL6NJ_G0021087	Rslcan18	80	50.495	MGP_C57BL6NJ_G0034908	Zfp26	89	50.495
MGP_C57BL6NJ_G0021087	Rslcan18	76	45.887	MGP_C57BL6NJ_G0020666	Zkscan4	67	46.457
MGP_C57BL6NJ_G0021087	Rslcan18	71	55.870	MGP_C57BL6NJ_G0032439	Zfp420	98	55.870
MGP_C57BL6NJ_G0021087	Rslcan18	81	48.333	MGP_C57BL6NJ_G0018791	Zfp867	98	48.333
MGP_C57BL6NJ_G0021087	Rslcan18	70	52.451	MGP_C57BL6NJ_G0034261	Zfp709	95	52.451
MGP_C57BL6NJ_G0021087	Rslcan18	80	47.292	MGP_C57BL6NJ_G0034262	Zfp882	99	47.292
MGP_C57BL6NJ_G0021087	Rslcan18	80	53.333	MGP_C57BL6NJ_G0032270	Zfp61	98	53.333
MGP_C57BL6NJ_G0021087	Rslcan18	80	53.712	MGP_C57BL6NJ_G0032271	Zfp94	96	53.712
MGP_C57BL6NJ_G0021087	Rslcan18	86	48.963	MGP_C57BL6NJ_G0034637	Zfp1	99	48.963
MGP_C57BL6NJ_G0021087	Rslcan18	80	53.156	MGP_C57BL6NJ_G0021088	Zfp759	99	53.156
MGP_C57BL6NJ_G0021087	Rslcan18	68	48.905	MGP_C57BL6NJ_G0031616	Zfp637	71	47.857
MGP_C57BL6NJ_G0021087	Rslcan18	97	55.814	MGP_C57BL6NJ_G0032267	Zfp111	96	55.814
MGP_C57BL6NJ_G0021087	Rslcan18	65	53.378	MGP_C57BL6NJ_G0032266	Zfp235	70	53.378
MGP_C57BL6NJ_G0021087	Rslcan18	80	53.160	MGP_C57BL6NJ_G0032265	Zfp112	69	53.160
MGP_C57BL6NJ_G0021087	Rslcan18	65	41.667	MGP_C57BL6NJ_G0033529	Zfp747	67	41.667
MGP_C57BL6NJ_G0021087	Rslcan18	82	47.791	MGP_C57BL6NJ_G0033528	E430018J23Rik	90	47.791
MGP_C57BL6NJ_G0021087	Rslcan18	70	49.402	MGP_C57BL6NJ_G0033526	Zfp768	64	47.368
MGP_C57BL6NJ_G0021087	Rslcan18	83	47.959	MGP_C57BL6NJ_G0032591	Zfp715	78	56.818
MGP_C57BL6NJ_G0021087	Rslcan18	84	45.136	MGP_C57BL6NJ_G0023666	Zscan10	98	45.136
MGP_C57BL6NJ_G0021087	Rslcan18	90	50.000	MGP_C57BL6NJ_G0032301	Zfp574	86	45.161
MGP_C57BL6NJ_G0021087	Rslcan18	80	49.425	MGP_C57BL6NJ_G0023637	Zfp51	94	49.425
MGP_C57BL6NJ_G0021087	Rslcan18	70	53.219	MGP_C57BL6NJ_G0023635	Zfp677	99	53.219
MGP_C57BL6NJ_G0021087	Rslcan18	83	51.948	MGP_C57BL6NJ_G0018653	Zfp354a	99	51.948
MGP_C57BL6NJ_G0021087	Rslcan18	65	41.071	MGP_C57BL6NJ_G0034479	Zfp319	86	40.708
MGP_C57BL6NJ_G0021087	Rslcan18	64	47.904	MGP_C57BL6NJ_G0029938	Zbtb49	64	47.887
MGP_C57BL6NJ_G0021087	Rslcan18	75	54.918	MGP_C57BL6NJ_G0026884	Zfp661	95	54.918
MGP_C57BL6NJ_G0021087	Rslcan18	66	45.833	MGP_C57BL6NJ_G0030303	4930522L14Rik	97	45.833
MGP_C57BL6NJ_G0021087	Rslcan18	82	46.561	MGP_C57BL6NJ_G0023659	Zfp945	99	46.561
MGP_C57BL6NJ_G0021087	Rslcan18	72	42.045	MGP_C57BL6NJ_G0030274	Gfi1	100	46.903
MGP_C57BL6NJ_G0021087	Rslcan18	68	45.565	MGP_C57BL6NJ_G0018741	Zfp672	99	39.773
MGP_C57BL6NJ_G0021087	Rslcan18	74	37.433	MGP_C57BL6NJ_G0031136	Repin1	95	37.433
MGP_C57BL6NJ_G0021087	Rslcan18	63	43.277	MGP_C57BL6NJ_G0031270	Prdm5	81	43.277
MGP_C57BL6NJ_G0021087	Rslcan18	79	52.041	MGP_C57BL6NJ_G0022420	Zfp251	94	52.041
MGP_C57BL6NJ_G0021087	Rslcan18	65	35.115	MGP_C57BL6NJ_G0027353	Zfp64	74	35.115
MGP_C57BL6NJ_G0021087	Rslcan18	81	50.400	MGP_C57BL6NJ_G0027315	Zfp334	100	50.400
MGP_C57BL6NJ_G0021087	Rslcan18	87	51.556	MGP_C57BL6NJ_G0018644	Zfp454	99	51.556
MGP_C57BL6NJ_G0021087	Rslcan18	66	38.150	MGP_C57BL6NJ_G0032019	Zfp865	79	37.104
MGP_C57BL6NJ_G0021087	Rslcan18	64	46.154	MGP_C57BL6NJ_G0032011	Zfp628	60	45.771