EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0021257 (Gene tree)
Gene ID: -
Gene Symbol: Tnpo1
Alias: AU021749|D13Ertd688e|IPO2|Kpnb2|MIP|MIP1|TRN
Full Name: transportin 1
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 102331 bases
Position: chr13:103599035-103701365
Accession: 2681523
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0038373	IBN_N	PF03810.19	8.2e-17	1	1
MGP_C57BL6NJ_P0038372	IBN_N	PF03810.19	8.2e-16	1	1
MGP_C57BL6NJ_P0038370	IBN_N	PF03810.19	1e-15	1	1
MGP_C57BL6NJ_P0038371	IBN_N	PF03810.19	1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0038371	-	8453	-	MGP_C57BL6NJ_P0038371	898 (aa)	-	-
MGP_C57BL6NJ_T0038370	-	8445	XM_006517636	MGP_C57BL6NJ_P0038370	890 (aa)	XP_006517699	Q8BFY9
MGP_C57BL6NJ_T0038373	-	614	-	MGP_C57BL6NJ_P0038373	178 (aa)	-	-
MGP_C57BL6NJ_T0038372	-	2503	-	MGP_C57BL6NJ_P0038372	807 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0021257's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0021257's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0021257	Tnpo1	99	85.821	MGP_C57BL6NJ_G0034385	Tnpo2	99	85.569