EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0021324 (Gene tree)
Gene ID: -
Gene Symbol: Ddx4
Alias: AV206478|Mvh|VASA|Vasa|mvh / m'vasa
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 57013 bases
Position: chr13:118595648-118652660
Accession: 102670
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0038604	DEAD	PF00270.29	4.5e-49	1	1
MGP_C57BL6NJ_P0038605	DEAD	PF00270.29	5e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0038605	-	2849	-	MGP_C57BL6NJ_P0038605	728 (aa)	-	-
MGP_C57BL6NJ_T0038604	-	2771	XM_006517524	MGP_C57BL6NJ_P0038604	702 (aa)	XP_006517587	Q61496

Gene Model

Click here to download MGP_C57BL6NJ_G0021324's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0021324's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0021324	Ddx4	56	34.271	MGP_C57BL6NJ_G0031854	Ddx47	93	33.760
MGP_C57BL6NJ_G0021324	Ddx4	52	33.687	MGP_C57BL6NJ_G0034195	Ddx49	74	34.048
MGP_C57BL6NJ_G0021324	Ddx4	53	38.684	MGP_C57BL6NJ_G0016945	Ddx59	59	38.684
MGP_C57BL6NJ_G0021324	Ddx4	54	30.326	MGP_C57BL6NJ_G0035026	Ddx25	80	30.488
MGP_C57BL6NJ_G0021324	Ddx4	56	30.691	MGP_C57BL6NJ_G0019870	Eif4a3	90	30.691
MGP_C57BL6NJ_G0021324	Ddx4	56	40.000	MGP_C57BL6NJ_G0035558	Ddx43	60	40.000
MGP_C57BL6NJ_G0021324	Ddx4	57	39.163	MGP_C57BL6NJ_G0022487	Ddx17	61	39.163
MGP_C57BL6NJ_G0021324	Ddx4	57	34.069	MGP_C57BL6NJ_G0019255	Ddx52	66	34.069
MGP_C57BL6NJ_G0021324	Ddx4	57	39.012	MGP_C57BL6NJ_G0019705	Ddx5	80	38.922
MGP_C57BL6NJ_G0021324	Ddx4	67	50.513	MGP_C57BL6NJ_G0036071	Ddx3x	69	51.528
MGP_C57BL6NJ_G0021324	Ddx4	51	30.390	MGP_C57BL6NJ_G0034626	Ddx19b	75	30.130
MGP_C57BL6NJ_G0021324	Ddx4	51	30.343	MGP_C57BL6NJ_G0034625	Ddx19a	75	30.343
MGP_C57BL6NJ_G0021324	Ddx4	62	52.596	MGP_C57BL6NJ_G0017321	D1Pas1	71	49.578
MGP_C57BL6NJ_G0021324	Ddx4	57	38.519	MGP_C57BL6NJ_G0020986	Ddx41	64	38.519