EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_C57BL6NJ_G0021693 (Gene tree)
Gene ID
-
Gene Symbol
Chd8
Alias
5830451P18Rik|AU015341|Duplin|HELSNF1|Kiaa1564|mKIAA1564
Full Name
chromodomain helicase DNA binding protein 8
Gene Type
protein_coding
Species
Mus_musculus_c57bl6nj
Status
putative
Strand
Minus strand
Length
67534 bases
Position
chr14:48282531-48350064
Accession
1915022
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_C57BL6NJ_P0039748ResIIIPF04851.159.6e-0811
MGP_C57BL6NJ_P0039746ResIIIPF04851.151.2e-0711
MGP_C57BL6NJ_P0039747ResIIIPF04851.151.2e-0711
MGP_C57BL6NJ_P0039748BRKPF07533.161e-1511
MGP_C57BL6NJ_P0039746BRKPF07533.161.1e-1511
MGP_C57BL6NJ_P0039747BRKPF07533.161.1e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_C57BL6NJ_T0039754-670-MGP_C57BL6NJ_P0039754222 (aa)--
MGP_C57BL6NJ_T0039755-674--- (aa)--
MGP_C57BL6NJ_T0039756-428--- (aa)--
MGP_C57BL6NJ_T0039757-479--- (aa)--
MGP_C57BL6NJ_T0039750-3350--- (aa)--
MGP_C57BL6NJ_T0039751-2444--- (aa)--
MGP_C57BL6NJ_T0039752-741--- (aa)--
MGP_C57BL6NJ_T0039753-911--- (aa)--
MGP_C57BL6NJ_T0039758-3323--- (aa)--
MGP_C57BL6NJ_T0039749-3543--- (aa)--
MGP_C57BL6NJ_T0039748-7097-MGP_C57BL6NJ_P00397482317 (aa)--
MGP_C57BL6NJ_T0039747-8452-MGP_C57BL6NJ_P00397472582 (aa)--
MGP_C57BL6NJ_T0039746-8190XM_006519476MGP_C57BL6NJ_P00397462582 (aa)XP_006519539Q09XV5
Gene Model
Click here to download MGP_C57BL6NJ_G0021693's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0021693's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_C57BL6NJ_G0021693Chd87965.125MGP_C57BL6NJ_G0028453Chd75869.626
MGP_C57BL6NJ_G0021693Chd86663.353MGP_C57BL6NJ_G0027234Chd68869.158
MGP_C57BL6NJ_G0021693Chd88368.910MGP_C57BL6NJ_G0034423Chd96768.674

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