EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0042163	DEAD	PF00270.29	1.7e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0042163	-	4761	-	MGP_C57BL6NJ_P0042163	652 (aa)	-	Q3U741

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0022487	Ddx17	57	37.374	MGP_C57BL6NJ_G0031854	Ddx47	85	36.869
MGP_C57BL6NJ_G0022487	Ddx17	62	30.843	MGP_C57BL6NJ_G0019255	Ddx52	68	30.456
MGP_C57BL6NJ_G0022487	Ddx17	56	33.880	MGP_C57BL6NJ_G0027329	Ddx27	56	32.558
MGP_C57BL6NJ_G0022487	Ddx17	53	32.778	MGP_C57BL6NJ_G0030529	Ddx55	57	32.778
MGP_C57BL6NJ_G0022487	Ddx17	59	45.113	MGP_C57BL6NJ_G0036071	Ddx3x	73	40.039
MGP_C57BL6NJ_G0022487	Ddx17	62	43.765	MGP_C57BL6NJ_G0017321	D1Pas1	73	39.535
MGP_C57BL6NJ_G0022487	Ddx17	51	30.556	MGP_C57BL6NJ_G0034568	Ddx28	66	30.556
MGP_C57BL6NJ_G0022487	Ddx17	60	39.110	MGP_C57BL6NJ_G0022715	Ddx23	51	39.110
MGP_C57BL6NJ_G0022487	Ddx17	52	30.205	MGP_C57BL6NJ_G0016816	Ddx18	51	30.259
MGP_C57BL6NJ_G0022487	Ddx17	53	30.556	MGP_C57BL6NJ_G0025950	Ddx31	54	31.579
MGP_C57BL6NJ_G0022487	Ddx17	55	33.962	MGP_C57BL6NJ_G0017699	Ddx50	54	33.962
MGP_C57BL6NJ_G0022487	Ddx17	53	35.277	MGP_C57BL6NJ_G0019870	Eif4a3	82	35.277
MGP_C57BL6NJ_G0022487	Ddx17	51	33.036	MGP_C57BL6NJ_G0018937	Eif4a1	81	33.333
MGP_C57BL6NJ_G0022487	Ddx17	56	37.903	MGP_C57BL6NJ_G0034195	Ddx49	74	37.903
MGP_C57BL6NJ_G0022487	Ddx17	62	39.952	MGP_C57BL6NJ_G0020986	Ddx41	65	39.952
MGP_C57BL6NJ_G0022487	Ddx17	56	32.275	MGP_C57BL6NJ_G0035026	Ddx25	76	31.078
MGP_C57BL6NJ_G0022487	Ddx17	91	69.320	MGP_C57BL6NJ_G0019705	Ddx5	93	83.598
MGP_C57BL6NJ_G0022487	Ddx17	67	43.527	MGP_C57BL6NJ_G0035558	Ddx43	68	43.527
MGP_C57BL6NJ_G0022487	Ddx17	64	34.048	MGP_C57BL6NJ_G0016945	Ddx59	67	34.048
MGP_C57BL6NJ_G0022487	Ddx17	61	39.163	MGP_C57BL6NJ_G0021324	Ddx4	57	39.163