EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0042202	APOBEC_N	PF08210.11	8.4e-82	1	2
MGP_C57BL6NJ_P0042202	APOBEC_N	PF08210.11	8.4e-82	2	2
MGP_C57BL6NJ_P0042206	APOBEC_N	PF08210.11	9.4e-82	1	2
MGP_C57BL6NJ_P0042206	APOBEC_N	PF08210.11	9.4e-82	2	2
MGP_C57BL6NJ_P0042203	APOBEC_N	PF08210.11	1.2e-81	1	2
MGP_C57BL6NJ_P0042203	APOBEC_N	PF08210.11	1.2e-81	2	2
MGP_C57BL6NJ_P0042207	APOBEC_N	PF08210.11	1.2e-81	1	2
MGP_C57BL6NJ_P0042207	APOBEC_N	PF08210.11	1.2e-81	2	2
MGP_C57BL6NJ_P0042201	APOBEC_N	PF08210.11	1.4e-81	1	2
MGP_C57BL6NJ_P0042201	APOBEC_N	PF08210.11	1.4e-81	2	2
MGP_C57BL6NJ_P0042209	APOBEC_N	PF08210.11	8.9e-60	1	2
MGP_C57BL6NJ_P0042209	APOBEC_N	PF08210.11	8.9e-60	2	2
MGP_C57BL6NJ_P0042199	APOBEC_N	PF08210.11	2.2e-27	1	1
MGP_C57BL6NJ_P0042198	APOBEC_N	PF08210.11	2.9e-26	1	1
MGP_C57BL6NJ_P0042210	APOBEC_N	PF08210.11	3.1e-24	1	1
MGP_C57BL6NJ_P0042209	APOBEC_C	PF05240.14	1e-53	1	2
MGP_C57BL6NJ_P0042209	APOBEC_C	PF05240.14	1e-53	2	2
MGP_C57BL6NJ_P0042202	APOBEC_C	PF05240.14	2.2e-53	1	2
MGP_C57BL6NJ_P0042202	APOBEC_C	PF05240.14	2.2e-53	2	2
MGP_C57BL6NJ_P0042206	APOBEC_C	PF05240.14	2.5e-53	1	2
MGP_C57BL6NJ_P0042206	APOBEC_C	PF05240.14	2.5e-53	2	2
MGP_C57BL6NJ_P0042203	APOBEC_C	PF05240.14	2.8e-53	1	2
MGP_C57BL6NJ_P0042203	APOBEC_C	PF05240.14	2.8e-53	2	2
MGP_C57BL6NJ_P0042207	APOBEC_C	PF05240.14	2.9e-53	1	2
MGP_C57BL6NJ_P0042207	APOBEC_C	PF05240.14	2.9e-53	2	2
MGP_C57BL6NJ_P0042201	APOBEC_C	PF05240.14	3.1e-53	1	2
MGP_C57BL6NJ_P0042201	APOBEC_C	PF05240.14	3.1e-53	2	2
MGP_C57BL6NJ_P0042199	APOBEC_C	PF05240.14	1.2e-27	1	1
MGP_C57BL6NJ_P0042198	APOBEC_C	PF05240.14	1.5e-27	1	1
MGP_C57BL6NJ_P0042210	APOBEC_C	PF05240.14	3.7e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0042210	-	650	-	MGP_C57BL6NJ_P0042210	85 (aa)	-	-
MGP_C57BL6NJ_T0042213	-	721	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0042198	-	759	XM_006521551	MGP_C57BL6NJ_P0042198	166 (aa)	XP_006521614	Q99J72
MGP_C57BL6NJ_T0042199	-	826	-	MGP_C57BL6NJ_P0042199	151 (aa)	-	-
MGP_C57BL6NJ_T0042212	-	2087	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0042208	-	2225	-	MGP_C57BL6NJ_P0042208	392 (aa)	-	-
MGP_C57BL6NJ_T0042209	-	1842	-	MGP_C57BL6NJ_P0042209	297 (aa)	-	-
MGP_C57BL6NJ_T0042211	-	739	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0042200	-	600	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0042201	-	1953	-	MGP_C57BL6NJ_P0042201	440 (aa)	-	-
MGP_C57BL6NJ_T0042202	-	2360	-	MGP_C57BL6NJ_P0042202	396 (aa)	-	-
MGP_C57BL6NJ_T0042203	-	2459	-	MGP_C57BL6NJ_P0042203	429 (aa)	-	-
MGP_C57BL6NJ_T0042204	-	699	-	MGP_C57BL6NJ_P0042204	79 (aa)	-	-
MGP_C57BL6NJ_T0042205	-	1217	-	MGP_C57BL6NJ_P0042205	46 (aa)	-	-
MGP_C57BL6NJ_T0042206	-	1977	-	MGP_C57BL6NJ_P0042206	407 (aa)	-	-
MGP_C57BL6NJ_T0042207	-	2765	-	MGP_C57BL6NJ_P0042207	430 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0022499	Apobec3	98	33.721	MGP_C57BL6NJ_G0024278	Apobec2	77	33.898
MGP_C57BL6NJ_G0022499	Apobec3	96	35.366	MGP_C57BL6NJ_G0031666	Apobec1	74	35.789
MGP_C57BL6NJ_G0022499	Apobec3	96	40.964	MGP_C57BL6NJ_G0031665	Aicda	91	38.251