EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0022715 (Gene tree)
Gene ID: -
Gene Symbol: Ddx23
Alias: 3110082M05Rik|4921506D17Rik
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 17690 bases
Position: chr15:104111242-104128931
Accession: 1921601
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0042910	DEAD	PF00270.29	2.4e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0042914	-	321	-	MGP_C57BL6NJ_P0042914	80 (aa)	-	-
MGP_C57BL6NJ_T0042915	-	610	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0042910	-	3266	XM_006521493	MGP_C57BL6NJ_P0042910	819 (aa)	XP_006521556	D3Z0M9
MGP_C57BL6NJ_T0042911	-	3093	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0042912	-	3411	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0042913	-	793	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0022715's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0022715's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0022715	Ddx23	51	39.110	MGP_C57BL6NJ_G0022487	Ddx17	60	39.110
MGP_C57BL6NJ_G0022715	Ddx23	53	38.063	MGP_C57BL6NJ_G0017321	D1Pas1	63	38.063
MGP_C57BL6NJ_G0022715	Ddx23	52	40.139	MGP_C57BL6NJ_G0020986	Ddx41	75	37.400
MGP_C57BL6NJ_G0022715	Ddx23	54	40.757	MGP_C57BL6NJ_G0035558	Ddx43	63	40.757
MGP_C57BL6NJ_G0022715	Ddx23	52	35.417	MGP_C57BL6NJ_G0016945	Ddx59	64	35.417
MGP_C57BL6NJ_G0022715	Ddx23	54	30.243	MGP_C57BL6NJ_G0019255	Ddx52	70	30.222
MGP_C57BL6NJ_G0022715	Ddx23	50	37.915	MGP_C57BL6NJ_G0019705	Ddx5	81	36.389
MGP_C57BL6NJ_G0022715	Ddx23	52	37.868	MGP_C57BL6NJ_G0036071	Ddx3x	63	37.753