EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0022879 (Gene tree)
Gene ID: -
Gene Symbol: Srl
Alias: 9830004M20Rik|AW108387|Sar|sar|sarcalumenin
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 69085 bases
Position: chr16:1023521-1092605
Accession: 2146620
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0043395	MMR_HSR1	PF01926.23	2.1e-08	1	1
MGP_C57BL6NJ_P0043396	MMR_HSR1	PF01926.23	7.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0043398	-	349	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0043395	-	3698	XM_006521687	MGP_C57BL6NJ_P0043395	472 (aa)	XP_006521750	Q7TQ48
MGP_C57BL6NJ_T0043397	-	366	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0043396	-	5000	-	MGP_C57BL6NJ_P0043396	910 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0022879's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0022879's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0022879	Srl	82	33.162	MGP_C57BL6NJ_G0032140	Ehd2	97	47.059
MGP_C57BL6NJ_G0022879	Srl	79	32.440	MGP_C57BL6NJ_G0024426	Ehd3	73	32.506
MGP_C57BL6NJ_G0022879	Srl	84	31.738	MGP_C57BL6NJ_G0026781	Ehd4	71	31.738
MGP_C57BL6NJ_G0022879	Srl	77	33.973	MGP_C57BL6NJ_G0025169	Ehd1	67	33.973