EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0022963 (Gene tree)
Gene ID: -
Gene Symbol: Snai2
Alias: Slug|Slugh|Snail2
Full Name: snail family zinc finger 2
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 3544 bases
Position: chr16:11966111-11969654
Accession: 1096393
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0043727	zf-C2H2	PF00096.26	1.6e-27	1	5
MGP_C57BL6NJ_P0043727	zf-C2H2	PF00096.26	1.6e-27	2	5
MGP_C57BL6NJ_P0043727	zf-C2H2	PF00096.26	1.6e-27	3	5
MGP_C57BL6NJ_P0043727	zf-C2H2	PF00096.26	1.6e-27	4	5
MGP_C57BL6NJ_P0043727	zf-C2H2	PF00096.26	1.6e-27	5	5
MGP_C57BL6NJ_P0043727	zf-met	PF12874.7	3.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0043727	-	2031	-	MGP_C57BL6NJ_P0043727	269 (aa)	-	P97469

Gene Model

Click here to download MGP_C57BL6NJ_G0022963's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0022963's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0022963	Snai2	50	38.776	MGP_C57BL6NJ_G0036250	Zic3	64	38.849
MGP_C57BL6NJ_G0022963	Snai2	55	38.750	MGP_C57BL6NJ_G0018741	Zfp672	90	38.750
MGP_C57BL6NJ_G0022963	Snai2	99	52.708	MGP_C57BL6NJ_G0027338	Snai1	98	53.650
MGP_C57BL6NJ_G0022963	Snai2	99	46.599	MGP_C57BL6NJ_G0034720	Snai3	99	46.552