EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_C57BL6NJ_G0023021 (Gene tree)
Gene ID
-
Gene Symbol
Trmt2a
Alias
Htf9-c|Htf9c|Htf9c {ECO:0000313|EMBL:EDK97507.1,GN ECO:0000313|MGI:MGI:96270}
Full Name
TRM2 tRNA methyltransferase 2A
Gene Type
protein_coding
Species
Mus_musculus_c57bl6nj
Status
putative
Strand
Plus strand
Length
6094 bases
Position
chr16:15726132-15732225
Accession
96270
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_C57BL6NJ_P0044001MTSPF05175.141.1e-0511
MGP_C57BL6NJ_P0043995MTSPF05175.143.6e-0511
MGP_C57BL6NJ_P0044000MTSPF05175.143.7e-0511
MGP_C57BL6NJ_P0043996MTSPF05175.148.1e-0511
MGP_C57BL6NJ_P0043995tRNA_U5-meth_trPF05958.114e-1711
MGP_C57BL6NJ_P0044000tRNA_U5-meth_trPF05958.114e-1711
MGP_C57BL6NJ_P0044001tRNA_U5-meth_trPF05958.113.1e-1611
MGP_C57BL6NJ_P0043996tRNA_U5-meth_trPF05958.117.7e-1011
MGP_C57BL6NJ_P0044001Methyltransf_31PF13847.63.7e-1111
MGP_C57BL6NJ_P0044000Methyltransf_31PF13847.61.2e-1011
MGP_C57BL6NJ_P0043995Methyltransf_31PF13847.61.2e-1011
MGP_C57BL6NJ_P0043996Methyltransf_31PF13847.63.2e-0611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_C57BL6NJ_T0043999-2553--- (aa)--
MGP_C57BL6NJ_T0043998-2971--- (aa)--
MGP_C57BL6NJ_T0043997-2082--- (aa)--
MGP_C57BL6NJ_T0043996-3520-MGP_C57BL6NJ_P0043996574 (aa)--
MGP_C57BL6NJ_T0043995-2367-MGP_C57BL6NJ_P0043995613 (aa)--
MGP_C57BL6NJ_T0043994-2805--- (aa)--
MGP_C57BL6NJ_T0044000-2235-MGP_C57BL6NJ_P0044000613 (aa)--
MGP_C57BL6NJ_T0044001-842-MGP_C57BL6NJ_P0044001280 (aa)--
MGP_C57BL6NJ_T0044002-276-MGP_C57BL6NJ_P004400270 (aa)--
MGP_C57BL6NJ_T0044003-603--- (aa)--
Gene Model
Click here to download MGP_C57BL6NJ_G0023021's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0023021's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_C57BL6NJ_G0023021Trmt2a8947.568MGP_C57BL6NJ_G0036559Trmt2b9340.171

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