EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0023094 (Gene tree)
Gene ID: -
Gene Symbol: Eif4a2
Alias: 4833432N07Rik|BM-010|Ddx2b|Eif4|eIF-4A-II|eIF4A-II
Full Name: eukaryotic translation initiation factor 4A2
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 20914 bases
Position: chr16:21154129-21175042
Accession: 106906
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0044311	ResIII	PF04851.15	1.1e-07	1	1
MGP_C57BL6NJ_P0044307	ResIII	PF04851.15	1.1e-07	1	1
MGP_C57BL6NJ_P0044312	ResIII	PF04851.15	1.5e-07	1	1
MGP_C57BL6NJ_P0044310	ResIII	PF04851.15	1.5e-07	1	1
MGP_C57BL6NJ_P0044311	DEAD	PF00270.29	7.8e-44	1	1
MGP_C57BL6NJ_P0044307	DEAD	PF00270.29	8.4e-44	1	1
MGP_C57BL6NJ_P0044312	DEAD	PF00270.29	1.1e-43	1	1
MGP_C57BL6NJ_P0044310	DEAD	PF00270.29	1.1e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0044307	-	1073	-	MGP_C57BL6NJ_P0044307	307 (aa)	-	-
MGP_C57BL6NJ_T0044306	-	776	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0044305	-	1782	XM_006521783	MGP_C57BL6NJ_P0044305	96 (aa)	XP_006521846	P10630
MGP_C57BL6NJ_T0044313	-	770	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0044314	-	698	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0044315	-	566	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0044316	-	545	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0044311	-	2552	-	MGP_C57BL6NJ_P0044311	310 (aa)	-	-
MGP_C57BL6NJ_T0044318	-	1572	-	MGP_C57BL6NJ_P0044318	97 (aa)	-	-
MGP_C57BL6NJ_T0044319	-	487	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0044317	-	1800	-	MGP_C57BL6NJ_P0044317	307 (aa)	-	-
MGP_C57BL6NJ_T0044312	-	1692	-	MGP_C57BL6NJ_P0044312	355 (aa)	-	-
MGP_C57BL6NJ_T0044309	-	386	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0044308	-	486	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0044320	-	583	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0044321	-	536	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0044310	-	1719	-	MGP_C57BL6NJ_P0044310	356 (aa)	-	-
MGP_C57BL6NJ_T0044323	-	516	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0044322	-	611	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0023094's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0023094's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0023094	Eif4a2	85	34.521	MGP_C57BL6NJ_G0035026	Ddx25	77	35.000
MGP_C57BL6NJ_G0023094	Eif4a2	88	35.501	MGP_C57BL6NJ_G0024038	Ddx39b	99	40.816
MGP_C57BL6NJ_G0023094	Eif4a2	91	36.224	MGP_C57BL6NJ_G0034626	Ddx19b	80	36.224
MGP_C57BL6NJ_G0023094	Eif4a2	91	36.340	MGP_C57BL6NJ_G0034625	Ddx19a	80	35.733
MGP_C57BL6NJ_G0023094	Eif4a2	88	34.688	MGP_C57BL6NJ_G0034335	Ddx39	86	34.688
MGP_C57BL6NJ_G0023094	Eif4a2	81	40.984	MGP_C57BL6NJ_G0018411	Ddx56	91	30.396
MGP_C57BL6NJ_G0023094	Eif4a2	92	60.317	MGP_C57BL6NJ_G0019870	Eif4a3	92	60.317
MGP_C57BL6NJ_G0023094	Eif4a2	88	30.240	MGP_C57BL6NJ_G0019255	Ddx52	59	32.676
MGP_C57BL6NJ_G0023094	Eif4a2	89	56.798	MGP_C57BL6NJ_G0031330	Gm5580	85	56.798
MGP_C57BL6NJ_G0023094	Eif4a2	89	56.798	MGP_C57BL6NJ_G0031331	Gm8994	85	56.798
MGP_C57BL6NJ_G0023094	Eif4a2	98	75.910	MGP_C57BL6NJ_G0018937	Eif4a1	99	72.477
MGP_C57BL6NJ_G0023094	Eif4a2	71	32.314	MGP_C57BL6NJ_G0019705	Ddx5	52	34.737
MGP_C57BL6NJ_G0023094	Eif4a2	93	33.634	MGP_C57BL6NJ_G0031854	Ddx47	92	33.634