EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0023141 (Gene tree)
Gene ID: -
Gene Symbol: Ncbp2
Alias: 20kDa|5930413E18Rik|AA536802|AI843301|C79367|Cbp20
Full Name: nuclear cap binding protein subunit 2
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 13028 bases
Position: chr16:30616831-30629858
Accession: 1915342
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0044483	RRM_1	PF00076.22	1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0044483	-	2070	-	MGP_C57BL6NJ_P0044483	156 (aa)	-	Q9CQ49
MGP_C57BL6NJ_T0044484	-	762	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0044485	-	574	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0044486	-	515	-	MGP_C57BL6NJ_P0044486	103 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0023141's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0023141's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0023141	Ncbp2	56	31.461	MGP_C57BL6NJ_G0036247	Rbmx	83	32.941
MGP_C57BL6NJ_G0023141	Ncbp2	71	33.333	MGP_C57BL6NJ_G0033576	Tial1	62	32.184
MGP_C57BL6NJ_G0023141	Ncbp2	78	33.607	MGP_C57BL6NJ_G0030592	Eif4h	56	31.690
MGP_C57BL6NJ_G0023141	Ncbp2	54	36.471	MGP_C57BL6NJ_G0017880	Cirbp	85	38.043
MGP_C57BL6NJ_G0023141	Ncbp2	51	36.000	MGP_C57BL6NJ_G0031411	Tia1	78	36.000