EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_C57BL6NJ_G0023449 (Gene tree)
Gene ID
-
Gene Symbol
Synj1
Alias
A930006D20Rik|AA675315|mKIAA0910
Full Name
synaptojanin 1
Gene Type
protein_coding
Species
Mus_musculus_c57bl6nj
Status
putative
Strand
Minus strand
Length
77626 bases
Position
chr16:94898255-94975880
Accession
1354961
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_C57BL6NJ_P0045501Exo_endo_phosPF03372.231.1e-1411
MGP_C57BL6NJ_P0045503Exo_endo_phosPF03372.231.1e-1411
MGP_C57BL6NJ_P0045500Exo_endo_phosPF03372.231.5e-1411
MGP_C57BL6NJ_P0045508Exo_endo_phosPF03372.232.6e-0711
MGP_C57BL6NJ_P0045501DUF1866PF08952.111.7e-5711
MGP_C57BL6NJ_P0045503DUF1866PF08952.111.8e-5711
MGP_C57BL6NJ_P0045500DUF1866PF08952.112.1e-5711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_C57BL6NJ_T0045506-354-MGP_C57BL6NJ_P0045506117 (aa)--
MGP_C57BL6NJ_T0045507-2743--- (aa)--
MGP_C57BL6NJ_T0045504-772--- (aa)--
MGP_C57BL6NJ_T0045505-547-MGP_C57BL6NJ_P0045505103 (aa)--
MGP_C57BL6NJ_T0045502-3501-MGP_C57BL6NJ_P0045502188 (aa)--
MGP_C57BL6NJ_T0045503-4771-MGP_C57BL6NJ_P00455031323 (aa)--
MGP_C57BL6NJ_T0045500-7090XM_006522837MGP_C57BL6NJ_P00455001607 (aa)XP_006522900D3Z1M7
MGP_C57BL6NJ_T0045501-7012-MGP_C57BL6NJ_P00455011309 (aa)--
MGP_C57BL6NJ_T0045508-2189-MGP_C57BL6NJ_P0045508693 (aa)--
MGP_C57BL6NJ_T0045509-947--- (aa)--
Gene Model
Click here to download MGP_C57BL6NJ_G0023449's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0023449's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_C57BL6NJ_G0023449Synj110059.770MGP_C57BL6NJ_G0023526Synj29959.581

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us