EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_C57BL6NJ_G0023526 (Gene tree)
Gene ID
-
Gene Symbol
Synj2
Alias
AI481647|Kiaa0348|SJ2|mKIAA0348
Full Name
synaptojanin 2
Gene Type
protein_coding
Species
Mus_musculus_c57bl6nj
Status
putative
Strand
Plus strand
Length
110584 bases
Position
chr17:3256059-3366642
Accession
1201671
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_C57BL6NJ_P0045858Exo_endo_phosPF03372.234.5e-1411
MGP_C57BL6NJ_P0045868Exo_endo_phosPF03372.234.6e-1411
MGP_C57BL6NJ_P0045865Exo_endo_phosPF03372.236.8e-1411
MGP_C57BL6NJ_P0045862Exo_endo_phosPF03372.239e-1411
MGP_C57BL6NJ_P0045859Exo_endo_phosPF03372.231.2e-1311
MGP_C57BL6NJ_P0045855Exo_endo_phosPF03372.231.3e-1311
MGP_C57BL6NJ_P0045866Exo_endo_phosPF03372.231.3e-1311
MGP_C57BL6NJ_P0045863Exo_endo_phosPF03372.231.5e-1311
MGP_C57BL6NJ_P0045861Exo_endo_phosPF03372.231.6e-1311
MGP_C57BL6NJ_P0045860Exo_endo_phosPF03372.231.8e-1311
MGP_C57BL6NJ_P0045857Exo_endo_phosPF03372.232e-1311
MGP_C57BL6NJ_P0045854Exo_endo_phosPF03372.232e-1311
MGP_C57BL6NJ_P0045864Exo_endo_phosPF03372.231e-0811
MGP_C57BL6NJ_P0045869DUF1866PF08952.113.1e-6011
MGP_C57BL6NJ_P0045868DUF1866PF08952.118.5e-6011
MGP_C57BL6NJ_P0045865DUF1866PF08952.111e-5911
MGP_C57BL6NJ_P0045862DUF1866PF08952.111.4e-5911
MGP_C57BL6NJ_P0045855DUF1866PF08952.111.6e-5911
MGP_C57BL6NJ_P0045866DUF1866PF08952.111.7e-5911
MGP_C57BL6NJ_P0045859DUF1866PF08952.111.8e-5911
MGP_C57BL6NJ_P0045863DUF1866PF08952.111.8e-5911
MGP_C57BL6NJ_P0045861DUF1866PF08952.112e-5911
MGP_C57BL6NJ_P0045860DUF1866PF08952.112.2e-5911
MGP_C57BL6NJ_P0045857DUF1866PF08952.112.3e-5911
MGP_C57BL6NJ_P0045854DUF1866PF08952.112.4e-5911
MGP_C57BL6NJ_P0045858DUF1866PF08952.116.5e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_C57BL6NJ_T0045854-5037XM_006523202MGP_C57BL6NJ_P00458541479 (aa)XP_006523265Q9D2G5
MGP_C57BL6NJ_T0045855-3591-MGP_C57BL6NJ_P00458551144 (aa)--
MGP_C57BL6NJ_T0045856-5533-MGP_C57BL6NJ_P004585684 (aa)--
MGP_C57BL6NJ_T0045857-4793-MGP_C57BL6NJ_P00458571434 (aa)--
MGP_C57BL6NJ_T0045858-2513-MGP_C57BL6NJ_P0045858660 (aa)--
MGP_C57BL6NJ_T0045859-4072-MGP_C57BL6NJ_P00458591216 (aa)--
MGP_C57BL6NJ_T0045869-1260-MGP_C57BL6NJ_P0045869384 (aa)--
MGP_C57BL6NJ_T0045868-2792-MGP_C57BL6NJ_P0045868725 (aa)--
MGP_C57BL6NJ_T0045861-5130-MGP_C57BL6NJ_P00458611273 (aa)--
MGP_C57BL6NJ_T0045860-4808-MGP_C57BL6NJ_P00458601394 (aa)--
MGP_C57BL6NJ_T0045863-4013-MGP_C57BL6NJ_P00458631194 (aa)--
MGP_C57BL6NJ_T0045862-3498-MGP_C57BL6NJ_P00458621016 (aa)--
MGP_C57BL6NJ_T0045865-2634-MGP_C57BL6NJ_P0045865824 (aa)--
MGP_C57BL6NJ_T0045864-2531-MGP_C57BL6NJ_P0045864535 (aa)--
MGP_C57BL6NJ_T0045867-460--- (aa)--
MGP_C57BL6NJ_T0045866-3778-MGP_C57BL6NJ_P00458661118 (aa)--
Gene Model
Click here to download MGP_C57BL6NJ_G0023526's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0023526's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_C57BL6NJ_G0023526Synj25034.421MGP_C57BL6NJ_G0018353-5634.421
MGP_C57BL6NJ_G0023526Synj25832.653MGP_C57BL6NJ_G0036183Ocrl5032.039
MGP_C57BL6NJ_G0023526Synj29959.581MGP_C57BL6NJ_G0023449Synj110059.770

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