EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0023666 (Gene tree)
Gene ID: -
Gene Symbol: Zscan10
Alias: BC068284|Zfp206|Zkscan10|Znf206|Zscan10
Full Name: zinc finger and SCAN domain containing 10
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 14862 bases
Position: chr17:23486036-23500897
Accession: 3040700
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0046225	zf-C2H2	PF00096.26	4.5e-68	1	12
MGP_C57BL6NJ_P0046225	zf-C2H2	PF00096.26	4.5e-68	2	12
MGP_C57BL6NJ_P0046225	zf-C2H2	PF00096.26	4.5e-68	3	12
MGP_C57BL6NJ_P0046225	zf-C2H2	PF00096.26	4.5e-68	4	12
MGP_C57BL6NJ_P0046225	zf-C2H2	PF00096.26	4.5e-68	5	12
MGP_C57BL6NJ_P0046225	zf-C2H2	PF00096.26	4.5e-68	6	12
MGP_C57BL6NJ_P0046225	zf-C2H2	PF00096.26	4.5e-68	7	12
MGP_C57BL6NJ_P0046225	zf-C2H2	PF00096.26	4.5e-68	8	12
MGP_C57BL6NJ_P0046225	zf-C2H2	PF00096.26	4.5e-68	9	12
MGP_C57BL6NJ_P0046225	zf-C2H2	PF00096.26	4.5e-68	10	12
MGP_C57BL6NJ_P0046225	zf-C2H2	PF00096.26	4.5e-68	11	12
MGP_C57BL6NJ_P0046225	zf-C2H2	PF00096.26	4.5e-68	12	12
MGP_C57BL6NJ_P0046226	zf-C2H2	PF00096.26	5.1e-67	1	12
MGP_C57BL6NJ_P0046226	zf-C2H2	PF00096.26	5.1e-67	2	12
MGP_C57BL6NJ_P0046226	zf-C2H2	PF00096.26	5.1e-67	3	12
MGP_C57BL6NJ_P0046226	zf-C2H2	PF00096.26	5.1e-67	4	12
MGP_C57BL6NJ_P0046226	zf-C2H2	PF00096.26	5.1e-67	5	12
MGP_C57BL6NJ_P0046226	zf-C2H2	PF00096.26	5.1e-67	6	12
MGP_C57BL6NJ_P0046226	zf-C2H2	PF00096.26	5.1e-67	7	12
MGP_C57BL6NJ_P0046226	zf-C2H2	PF00096.26	5.1e-67	8	12
MGP_C57BL6NJ_P0046226	zf-C2H2	PF00096.26	5.1e-67	9	12
MGP_C57BL6NJ_P0046226	zf-C2H2	PF00096.26	5.1e-67	10	12
MGP_C57BL6NJ_P0046226	zf-C2H2	PF00096.26	5.1e-67	11	12
MGP_C57BL6NJ_P0046226	zf-C2H2	PF00096.26	5.1e-67	12	12
MGP_C57BL6NJ_P0046228	zf-C2H2	PF00096.26	4.9e-66	1	12
MGP_C57BL6NJ_P0046228	zf-C2H2	PF00096.26	4.9e-66	2	12
MGP_C57BL6NJ_P0046228	zf-C2H2	PF00096.26	4.9e-66	3	12
MGP_C57BL6NJ_P0046228	zf-C2H2	PF00096.26	4.9e-66	4	12
MGP_C57BL6NJ_P0046228	zf-C2H2	PF00096.26	4.9e-66	5	12
MGP_C57BL6NJ_P0046228	zf-C2H2	PF00096.26	4.9e-66	6	12
MGP_C57BL6NJ_P0046228	zf-C2H2	PF00096.26	4.9e-66	7	12
MGP_C57BL6NJ_P0046228	zf-C2H2	PF00096.26	4.9e-66	8	12
MGP_C57BL6NJ_P0046228	zf-C2H2	PF00096.26	4.9e-66	9	12
MGP_C57BL6NJ_P0046228	zf-C2H2	PF00096.26	4.9e-66	10	12
MGP_C57BL6NJ_P0046228	zf-C2H2	PF00096.26	4.9e-66	11	12
MGP_C57BL6NJ_P0046228	zf-C2H2	PF00096.26	4.9e-66	12	12
MGP_C57BL6NJ_P0046227	zf-C2H2	PF00096.26	2e-64	1	12
MGP_C57BL6NJ_P0046227	zf-C2H2	PF00096.26	2e-64	2	12
MGP_C57BL6NJ_P0046227	zf-C2H2	PF00096.26	2e-64	3	12
MGP_C57BL6NJ_P0046227	zf-C2H2	PF00096.26	2e-64	4	12
MGP_C57BL6NJ_P0046227	zf-C2H2	PF00096.26	2e-64	5	12
MGP_C57BL6NJ_P0046227	zf-C2H2	PF00096.26	2e-64	6	12
MGP_C57BL6NJ_P0046227	zf-C2H2	PF00096.26	2e-64	7	12
MGP_C57BL6NJ_P0046227	zf-C2H2	PF00096.26	2e-64	8	12
MGP_C57BL6NJ_P0046227	zf-C2H2	PF00096.26	2e-64	9	12
MGP_C57BL6NJ_P0046227	zf-C2H2	PF00096.26	2e-64	10	12
MGP_C57BL6NJ_P0046227	zf-C2H2	PF00096.26	2e-64	11	12
MGP_C57BL6NJ_P0046227	zf-C2H2	PF00096.26	2e-64	12	12
MGP_C57BL6NJ_P0046224	zf-C2H2	PF00096.26	5.4e-64	1	12
MGP_C57BL6NJ_P0046224	zf-C2H2	PF00096.26	5.4e-64	2	12
MGP_C57BL6NJ_P0046224	zf-C2H2	PF00096.26	5.4e-64	3	12
MGP_C57BL6NJ_P0046224	zf-C2H2	PF00096.26	5.4e-64	4	12
MGP_C57BL6NJ_P0046224	zf-C2H2	PF00096.26	5.4e-64	5	12
MGP_C57BL6NJ_P0046224	zf-C2H2	PF00096.26	5.4e-64	6	12
MGP_C57BL6NJ_P0046224	zf-C2H2	PF00096.26	5.4e-64	7	12
MGP_C57BL6NJ_P0046224	zf-C2H2	PF00096.26	5.4e-64	8	12
MGP_C57BL6NJ_P0046224	zf-C2H2	PF00096.26	5.4e-64	9	12
MGP_C57BL6NJ_P0046224	zf-C2H2	PF00096.26	5.4e-64	10	12
MGP_C57BL6NJ_P0046224	zf-C2H2	PF00096.26	5.4e-64	11	12
MGP_C57BL6NJ_P0046224	zf-C2H2	PF00096.26	5.4e-64	12	12
MGP_C57BL6NJ_P0046229	zf-C2H2	PF00096.26	1.6e-08	1	2
MGP_C57BL6NJ_P0046229	zf-C2H2	PF00096.26	1.6e-08	2	2
MGP_C57BL6NJ_P0046228	zf-met	PF12874.7	3.8e-07	1	1
MGP_C57BL6NJ_P0046227	zf-met	PF12874.7	1.1e-05	1	1
MGP_C57BL6NJ_P0046224	zf-met	PF12874.7	2.3e-05	1	1
MGP_C57BL6NJ_P0046225	zf-met	PF12874.7	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0046228	-	1902	-	MGP_C57BL6NJ_P0046228	543 (aa)	-	-
MGP_C57BL6NJ_T0046229	-	1074	-	MGP_C57BL6NJ_P0046229	329 (aa)	-	-
MGP_C57BL6NJ_T0046226	-	2698	-	MGP_C57BL6NJ_P0046226	782 (aa)	-	-
MGP_C57BL6NJ_T0046227	-	2271	-	MGP_C57BL6NJ_P0046227	702 (aa)	-	-
MGP_C57BL6NJ_T0046224	-	2609	XM_011246504	MGP_C57BL6NJ_P0046224	750 (aa)	XP_011244806	Q3URR7
MGP_C57BL6NJ_T0046225	-	2368	-	MGP_C57BL6NJ_P0046225	672 (aa)	-	-
MGP_C57BL6NJ_T0046231	-	891	-	MGP_C57BL6NJ_P0046231	149 (aa)	-	-
MGP_C57BL6NJ_T0046230	-	531	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0046233	-	1006	-	MGP_C57BL6NJ_P0046233	190 (aa)	-	-
MGP_C57BL6NJ_T0046232	-	909	-	MGP_C57BL6NJ_P0046232	190 (aa)	-	-
MGP_C57BL6NJ_T0046235	-	548	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0046234	-	844	-	MGP_C57BL6NJ_P0046234	262 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0023666's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0023666's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0023666	Zscan10	78	40.179	MGP_C57BL6NJ_G0032439	Zfp420	97	41.080
MGP_C57BL6NJ_G0023666	Zscan10	89	47.953	MGP_C57BL6NJ_G0029938	Zbtb49	62	50.704
MGP_C57BL6NJ_G0023666	Zscan10	75	47.667	MGP_C57BL6NJ_G0022420	Zfp251	67	47.667
MGP_C57BL6NJ_G0023666	Zscan10	86	32.915	MGP_C57BL6NJ_G0032301	Zfp574	93	33.902
MGP_C57BL6NJ_G0023666	Zscan10	74	37.631	MGP_C57BL6NJ_G0018741	Zfp672	100	42.857
MGP_C57BL6NJ_G0023666	Zscan10	76	45.914	MGP_C57BL6NJ_G0033526	Zfp768	51	44.944
MGP_C57BL6NJ_G0023666	Zscan10	78	43.254	MGP_C57BL6NJ_G0033528	E430018J23Rik	79	43.254
MGP_C57BL6NJ_G0023666	Zscan10	78	42.126	MGP_C57BL6NJ_G0033529	Zfp747	66	42.126
MGP_C57BL6NJ_G0023666	Zscan10	99	37.143	MGP_C57BL6NJ_G0025014	Zfp236	77	37.143
MGP_C57BL6NJ_G0023666	Zscan10	80	37.160	MGP_C57BL6NJ_G0018791	Zfp867	83	37.160
MGP_C57BL6NJ_G0023666	Zscan10	83	50.862	MGP_C57BL6NJ_G0031616	Zfp637	82	50.442
MGP_C57BL6NJ_G0023666	Zscan10	81	41.509	MGP_C57BL6NJ_G0026884	Zfp661	63	44.082
MGP_C57BL6NJ_G0023666	Zscan10	80	39.935	MGP_C57BL6NJ_G0034971	Zfp872	97	39.935
MGP_C57BL6NJ_G0023666	Zscan10	79	34.332	MGP_C57BL6NJ_G0034262	Zfp882	85	35.160
MGP_C57BL6NJ_G0023666	Zscan10	78	36.824	MGP_C57BL6NJ_G0034261	Zfp709	88	37.729
MGP_C57BL6NJ_G0023666	Zscan10	75	44.554	MGP_C57BL6NJ_G0018644	Zfp454	70	41.854
MGP_C57BL6NJ_G0023666	Zscan10	78	34.906	MGP_C57BL6NJ_G0031136	Repin1	92	36.705
MGP_C57BL6NJ_G0023666	Zscan10	78	43.165	MGP_C57BL6NJ_G0029473	Zbtb17	72	34.627
MGP_C57BL6NJ_G0023666	Zscan10	76	37.107	MGP_C57BL6NJ_G0027353	Zfp64	86	33.913
MGP_C57BL6NJ_G0023666	Zscan10	78	37.313	MGP_C57BL6NJ_G0023659	Zfp945	79	37.313
MGP_C57BL6NJ_G0023666	Zscan10	74	41.818	MGP_C57BL6NJ_G0032020	-	73	30.796
MGP_C57BL6NJ_G0023666	Zscan10	79	35.235	MGP_C57BL6NJ_G0031270	Prdm5	90	35.235
MGP_C57BL6NJ_G0023666	Zscan10	78	37.010	MGP_C57BL6NJ_G0021105	Zfp748	92	37.010
MGP_C57BL6NJ_G0023666	Zscan10	79	39.255	MGP_C57BL6NJ_G0034908	Zfp26	78	39.024
MGP_C57BL6NJ_G0023666	Zscan10	77	42.771	MGP_C57BL6NJ_G0030274	Gfi1	100	42.857
MGP_C57BL6NJ_G0023666	Zscan10	77	40.146	MGP_C57BL6NJ_G0032265	Zfp112	56	44.978
MGP_C57BL6NJ_G0023666	Zscan10	79	47.009	MGP_C57BL6NJ_G0032266	Zfp235	61	41.880
MGP_C57BL6NJ_G0023666	Zscan10	78	38.046	MGP_C57BL6NJ_G0032267	Zfp111	69	42.609
MGP_C57BL6NJ_G0023666	Zscan10	76	41.339	MGP_C57BL6NJ_G0027315	Zfp334	67	40.000
MGP_C57BL6NJ_G0023666	Zscan10	83	46.053	MGP_C57BL6NJ_G0034637	Zfp1	79	46.460
MGP_C57BL6NJ_G0023666	Zscan10	77	37.696	MGP_C57BL6NJ_G0019380	Zfp652	59	37.696
MGP_C57BL6NJ_G0023666	Zscan10	76	32.797	MGP_C57BL6NJ_G0016956	Zbtb41	53	32.797
MGP_C57BL6NJ_G0023666	Zscan10	98	45.136	MGP_C57BL6NJ_G0021087	Rslcan18	84	45.136
MGP_C57BL6NJ_G0023666	Zscan10	90	33.915	MGP_C57BL6NJ_G0021088	Zfp759	99	33.784
MGP_C57BL6NJ_G0023666	Zscan10	90	36.161	MGP_C57BL6NJ_G0032591	Zfp715	68	36.667
MGP_C57BL6NJ_G0023666	Zscan10	80	39.080	MGP_C57BL6NJ_G0023635	Zfp677	91	38.443
MGP_C57BL6NJ_G0023666	Zscan10	78	39.550	MGP_C57BL6NJ_G0023637	Zfp51	88	39.677
MGP_C57BL6NJ_G0023666	Zscan10	77	40.456	MGP_C57BL6NJ_G0032271	Zfp94	70	44.402
MGP_C57BL6NJ_G0023666	Zscan10	78	46.983	MGP_C57BL6NJ_G0032270	Zfp61	56	46.983
MGP_C57BL6NJ_G0023666	Zscan10	80	33.503	MGP_C57BL6NJ_G0030303	4930522L14Rik	98	33.854
MGP_C57BL6NJ_G0023666	Zscan10	89	43.564	MGP_C57BL6NJ_G0020666	Zkscan4	67	40.667
MGP_C57BL6NJ_G0023666	Zscan10	75	35.128	MGP_C57BL6NJ_G0034479	Zfp319	93	34.081
MGP_C57BL6NJ_G0023666	Zscan10	79	41.214	MGP_C57BL6NJ_G0018653	Zfp354a	80	41.214
MGP_C57BL6NJ_G0023666	Zscan10	76	46.199	MGP_C57BL6NJ_G0032011	Zfp628	63	46.199
MGP_C57BL6NJ_G0023666	Zscan10	86	31.579	MGP_C57BL6NJ_G0032019	Zfp865	82	31.579