EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0023898 (Gene tree)
Gene ID: -
Gene Symbol: U2af1
Alias: 2010107D16Rik|35kDa
Full Name: U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 14787 bases
Position: chr17:32520419-32535205
Accession: 98884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0047191	zf-CCCH	PF00642.24	1.6e-13	1	2
MGP_C57BL6NJ_P0047191	zf-CCCH	PF00642.24	1.6e-13	2	2
MGP_C57BL6NJ_P0047192	zf-CCCH	PF00642.24	1.6e-13	1	2
MGP_C57BL6NJ_P0047192	zf-CCCH	PF00642.24	1.6e-13	2	2
MGP_C57BL6NJ_P0047192	RRM_1	PF00076.22	3.1e-06	1	1
MGP_C57BL6NJ_P0047191	RRM_1	PF00076.22	3.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0047192	-	920	-	MGP_C57BL6NJ_P0047192	244 (aa)	-	-
MGP_C57BL6NJ_T0047191	-	920	XM_006523472	MGP_C57BL6NJ_P0047191	244 (aa)	XP_006523535	Q9D883

Gene Model

Click here to download MGP_C57BL6NJ_G0023898's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0023898's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0023898	U2af1	82	86.935	MGP_C57BL6NJ_G0032479	U2af1l4	100	90.385