EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0023942 (Gene tree)
Gene ID: -
Gene Symbol: Rab11b
Alias: A730055L17Rik|RAB11B|Rab11BGN
Full Name: RAB11B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 23092 bases
Position: chr17:34915069-34938160
Accession: 99425
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0047343	MMR_HSR1	PF01926.23	5.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0047343	-	6015	XM_011246326	MGP_C57BL6NJ_P0047343	218 (aa)	XP_006523950	P46638
MGP_C57BL6NJ_T0047346	-	846	-	MGP_C57BL6NJ_P0047346	149 (aa)	-	-
MGP_C57BL6NJ_T0047347	-	503	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0047344	-	1567	-	MGP_C57BL6NJ_P0047344	193 (aa)	-	-
MGP_C57BL6NJ_T0047345	-	1029	-	MGP_C57BL6NJ_P0047345	124 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0023942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0023942's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0023942	Rab11b	93	44.604	MGP_C57BL6NJ_G0032997	Rab30	97	39.524
MGP_C57BL6NJ_G0023942	Rab11b	95	47.887	MGP_C57BL6NJ_G0024539	Rab18	78	47.531
MGP_C57BL6NJ_G0023942	Rab11b	65	30.986	MGP_C57BL6NJ_G0016921	Arl8a	72	30.986
MGP_C57BL6NJ_G0023942	Rab11b	77	32.203	MGP_C57BL6NJ_G0019601	Arl4d	57	32.203
MGP_C57BL6NJ_G0023942	Rab11b	91	42.222	MGP_C57BL6NJ_G0024384	Rab31	86	40.476
MGP_C57BL6NJ_G0023942	Rab11b	97	53.793	MGP_C57BL6NJ_G0026068	Rab14	97	53.741
MGP_C57BL6NJ_G0023942	Rab11b	94	49.286	MGP_C57BL6NJ_G0030405	Rab35	99	43.062
MGP_C57BL6NJ_G0023942	Rab11b	94	34.123	MGP_C57BL6NJ_G0017745	Rab36	79	34.123
MGP_C57BL6NJ_G0023942	Rab11b	89	42.336	MGP_C57BL6NJ_G0036600	Rab9b	86	41.040
MGP_C57BL6NJ_G0023942	Rab11b	95	55.634	MGP_C57BL6NJ_G0025106	Rab1b	99	48.095
MGP_C57BL6NJ_G0023942	Rab11b	91	36.296	MGP_C57BL6NJ_G0035686	Rab6b	77	35.404
MGP_C57BL6NJ_G0023942	Rab11b	79	37.288	MGP_C57BL6NJ_G0030553	Ran	89	34.416
MGP_C57BL6NJ_G0023942	Rab11b	90	40.580	MGP_C57BL6NJ_G0036753	Rab9	87	40.110
MGP_C57BL6NJ_G0023942	Rab11b	89	38.686	MGP_C57BL6NJ_G0031441	Rab7	93	42.857
MGP_C57BL6NJ_G0023942	Rab11b	91	37.778	MGP_C57BL6NJ_G0033057	Rab6a	75	38.217
MGP_C57BL6NJ_G0023942	Rab11b	93	57.246	MGP_C57BL6NJ_G0028452	Rab2a	81	55.556
MGP_C57BL6NJ_G0023942	Rab11b	97	71.034	MGP_C57BL6NJ_G0027819	Rab25	100	61.435
MGP_C57BL6NJ_G0023942	Rab11b	91	42.963	MGP_C57BL6NJ_G0027382	Rab22a	81	42.675
MGP_C57BL6NJ_G0023942	Rab11b	77	40.000	MGP_C57BL6NJ_G0022651	Rabl2	69	36.943
MGP_C57BL6NJ_G0023942	Rab11b	81	34.426	MGP_C57BL6NJ_G0028104	Nras	95	37.241
MGP_C57BL6NJ_G0023942	Rab11b	89	48.120	MGP_C57BL6NJ_G0024293	Rab5a	90	41.667
MGP_C57BL6NJ_G0023942	Rab11b	90	49.265	MGP_C57BL6NJ_G0036361	Rab39b	82	47.126
MGP_C57BL6NJ_G0023942	Rab11b	90	43.382	MGP_C57BL6NJ_G0027616	Rab33b	76	39.773
MGP_C57BL6NJ_G0023942	Rab11b	81	34.711	MGP_C57BL6NJ_G0033708	Hras	85	36.420
MGP_C57BL6NJ_G0023942	Rab11b	97	35.417	MGP_C57BL6NJ_G0016293	Rab23	80	33.508
MGP_C57BL6NJ_G0023942	Rab11b	81	31.405	MGP_C57BL6NJ_G0035663	Mras	81	34.706
MGP_C57BL6NJ_G0023942	Rab11b	89	49.624	MGP_C57BL6NJ_G0019558	Rab5c	75	48.447
MGP_C57BL6NJ_G0023942	Rab11b	81	39.669	MGP_C57BL6NJ_G0032029	Rasl2-9	70	37.013
MGP_C57BL6NJ_G0023942	Rab11b	80	31.746	MGP_C57BL6NJ_G0020090	Arl4a	60	31.746
MGP_C57BL6NJ_G0023942	Rab11b	90	41.912	MGP_C57BL6NJ_G0036192	Rab33a	75	40.331
MGP_C57BL6NJ_G0023942	Rab11b	78	41.026	MGP_C57BL6NJ_G0019159	Rab34	70	33.880
MGP_C57BL6NJ_G0023942	Rab11b	93	46.763	MGP_C57BL6NJ_G0020255	Rab15	82	44.000
MGP_C57BL6NJ_G0023942	Rab11b	81	33.884	MGP_C57BL6NJ_G0031923	Kras	93	34.066
MGP_C57BL6NJ_G0023942	Rab11b	97	100.000	MGP_C57BL6NJ_G0035435	Rab11a	100	96.078
MGP_C57BL6NJ_G0023942	Rab11b	98	53.425	MGP_C57BL6NJ_G0018457	Rab1a	100	45.581
MGP_C57BL6NJ_G0023942	Rab11b	93	44.203	MGP_C57BL6NJ_G0024393	Rab12	84	37.736
MGP_C57BL6NJ_G0023942	Rab11b	93	56.522	MGP_C57BL6NJ_G0021694	Rab2b	99	48.387
MGP_C57BL6NJ_G0023942	Rab11b	91	44.118	MGP_C57BL6NJ_G0019764	Rab37	77	44.578
MGP_C57BL6NJ_G0023942	Rab11b	93	31.333	MGP_C57BL6NJ_G0030817	Rasl11a	62	31.333
MGP_C57BL6NJ_G0023942	Rab11b	89	34.586	MGP_C57BL6NJ_G0029786	Rheb	89	34.146