EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_C57BL6NJ_G0024010 (Gene tree)
Gene ID
-
Gene Symbol
Vars
Alias
Bat-6|Bat6|D17H6S56E|G7a|Vars2|Vars2GN
Full Name
valyl-tRNA synthetase
Gene Type
protein_coding
Species
Mus_musculus_c57bl6nj
Status
putative
Strand
Plus strand
Length
15296 bases
Position
chr17:36474773-36490068
Accession
90675
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_C57BL6NJ_P0047696tRNA-synt_1gPF09334.118.9e-1111
MGP_C57BL6NJ_P0047697tRNA-synt_1gPF09334.119.4e-1111
MGP_C57BL6NJ_P0047696Anticodon_1PF08264.133.9e-3211
MGP_C57BL6NJ_P0047697Anticodon_1PF08264.134.1e-3211
MGP_C57BL6NJ_P0047696tRNA-synt_1PF00133.221.5e-20111
MGP_C57BL6NJ_P0047697tRNA-synt_1PF00133.221.6e-20111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_C57BL6NJ_T0047702-347--- (aa)--
MGP_C57BL6NJ_T0047703-746--- (aa)--
MGP_C57BL6NJ_T0047700-3731--- (aa)--
MGP_C57BL6NJ_T0047701-475--- (aa)--
MGP_C57BL6NJ_T0047698-819-MGP_C57BL6NJ_P0047698230 (aa)--
MGP_C57BL6NJ_T0047699-423-MGP_C57BL6NJ_P0047699125 (aa)--
MGP_C57BL6NJ_T0047704-557--- (aa)--
MGP_C57BL6NJ_T0047705-806--- (aa)--
MGP_C57BL6NJ_T0047696-4137XM_017317395MGP_C57BL6NJ_P00476961263 (aa)XP_017172884Q9Z1Q9
MGP_C57BL6NJ_T0047697-4048-MGP_C57BL6NJ_P00476971278 (aa)--
MGP_C57BL6NJ_T0047706-388-MGP_C57BL6NJ_P0047706129 (aa)--
MGP_C57BL6NJ_T0047708-826--- (aa)--
MGP_C57BL6NJ_T0047707-744--- (aa)--
Gene Model
Click here to download MGP_C57BL6NJ_G0024010's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0024010's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_C57BL6NJ_G0024010Vars8250.096MGP_C57BL6NJ_G0024051Vars29252.477

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us