EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0024293 (Gene tree)
Gene ID: -
Gene Symbol: Rab5a
Alias: 2410015H04Rik|AI663973|AU021172|nnyRab5a
Full Name: RAB5A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 31865 bases
Position: chr17:57157332-57189196
Accession: 105926
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0048627	MMR_HSR1	PF01926.23	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0048627	-	1632	-	MGP_C57BL6NJ_P0048627	215 (aa)	-	Q9CQD1

Gene Model

Click here to download MGP_C57BL6NJ_G0024293's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0024293's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0024293	Rab5a	90	35.323	MGP_C57BL6NJ_G0036600	Rab9b	97	35.323
MGP_C57BL6NJ_G0024293	Rab5a	56	33.065	MGP_C57BL6NJ_G0031541	Arl8b	63	33.065
MGP_C57BL6NJ_G0024293	Rab5a	81	43.678	MGP_C57BL6NJ_G0032997	Rab30	86	43.678
MGP_C57BL6NJ_G0024293	Rab5a	82	31.667	MGP_C57BL6NJ_G0033708	Hras	94	31.667
MGP_C57BL6NJ_G0024293	Rab5a	60	32.576	MGP_C57BL6NJ_G0016921	Arl8a	66	32.576
MGP_C57BL6NJ_G0024293	Rab5a	73	32.500	MGP_C57BL6NJ_G0019159	Rab34	62	32.500
MGP_C57BL6NJ_G0024293	Rab5a	90	40.816	MGP_C57BL6NJ_G0024539	Rab18	93	40.816
MGP_C57BL6NJ_G0024293	Rab5a	80	31.667	MGP_C57BL6NJ_G0031923	Kras	94	31.667
MGP_C57BL6NJ_G0024293	Rab5a	90	46.429	MGP_C57BL6NJ_G0025106	Rab1b	96	46.429
MGP_C57BL6NJ_G0024293	Rab5a	90	49.231	MGP_C57BL6NJ_G0027382	Rab22a	98	49.231
MGP_C57BL6NJ_G0024293	Rab5a	100	87.500	MGP_C57BL6NJ_G0019558	Rab5c	100	87.500
MGP_C57BL6NJ_G0024293	Rab5a	74	38.125	MGP_C57BL6NJ_G0016293	Rab23	67	38.125
MGP_C57BL6NJ_G0024293	Rab5a	95	42.718	MGP_C57BL6NJ_G0035686	Rab6b	98	42.718
MGP_C57BL6NJ_G0024293	Rab5a	74	35.928	MGP_C57BL6NJ_G0022651	Rabl2	72	35.928
MGP_C57BL6NJ_G0024293	Rab5a	55	30.159	MGP_C57BL6NJ_G0020090	Arl4a	60	30.159
MGP_C57BL6NJ_G0024293	Rab5a	75	34.146	MGP_C57BL6NJ_G0030553	Ran	94	34.146
MGP_C57BL6NJ_G0024293	Rab5a	77	41.520	MGP_C57BL6NJ_G0031441	Rab7	97	45.263
MGP_C57BL6NJ_G0024293	Rab5a	89	38.614	MGP_C57BL6NJ_G0026068	Rab14	94	38.614
MGP_C57BL6NJ_G0024293	Rab5a	78	31.737	MGP_C57BL6NJ_G0032029	Rasl2-9	76	31.737
MGP_C57BL6NJ_G0024293	Rab5a	90	34.328	MGP_C57BL6NJ_G0036753	Rab9	97	34.328
MGP_C57BL6NJ_G0024293	Rab5a	95	41.951	MGP_C57BL6NJ_G0019764	Rab37	93	41.951
MGP_C57BL6NJ_G0024293	Rab5a	73	33.121	MGP_C57BL6NJ_G0029786	Rheb	85	33.121
MGP_C57BL6NJ_G0024293	Rab5a	95	41.546	MGP_C57BL6NJ_G0033057	Rab6a	98	41.546
MGP_C57BL6NJ_G0024293	Rab5a	91	47.449	MGP_C57BL6NJ_G0024384	Rab31	98	47.449
MGP_C57BL6NJ_G0024293	Rab5a	90	41.667	MGP_C57BL6NJ_G0023942	Rab11b	89	48.120
MGP_C57BL6NJ_G0024293	Rab5a	75	41.566	MGP_C57BL6NJ_G0036192	Rab33a	70	41.566
MGP_C57BL6NJ_G0024293	Rab5a	90	43.814	MGP_C57BL6NJ_G0018457	Rab1a	95	43.814
MGP_C57BL6NJ_G0024293	Rab5a	81	37.989	MGP_C57BL6NJ_G0024393	Rab12	74	37.989
MGP_C57BL6NJ_G0024293	Rab5a	75	36.585	MGP_C57BL6NJ_G0036361	Rab39b	77	36.585
MGP_C57BL6NJ_G0024293	Rab5a	75	41.615	MGP_C57BL6NJ_G0028452	Rab2a	97	36.667
MGP_C57BL6NJ_G0024293	Rab5a	76	32.727	MGP_C57BL6NJ_G0028104	Nras	99	34.667
MGP_C57BL6NJ_G0024293	Rab5a	90	37.436	MGP_C57BL6NJ_G0030405	Rab35	96	37.436
MGP_C57BL6NJ_G0024293	Rab5a	74	40.881	MGP_C57BL6NJ_G0020255	Rab15	75	40.881
MGP_C57BL6NJ_G0024293	Rab5a	91	30.244	MGP_C57BL6NJ_G0017745	Rab36	77	30.244
MGP_C57BL6NJ_G0024293	Rab5a	91	41.951	MGP_C57BL6NJ_G0035435	Rab11a	88	48.148
MGP_C57BL6NJ_G0024293	Rab5a	90	40.704	MGP_C57BL6NJ_G0027819	Rab25	93	40.704
MGP_C57BL6NJ_G0024293	Rab5a	78	41.916	MGP_C57BL6NJ_G0021694	Rab2b	79	44.079
MGP_C57BL6NJ_G0024293	Rab5a	77	40.351	MGP_C57BL6NJ_G0027616	Rab33b	75	40.351