EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0024393 (Gene tree)
Gene ID: -
Gene Symbol: Rab12
Alias: 2900054P15Rik|AW555448|C77700
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 28525 bases
Position: chr17:71340311-71368835
Accession: 894284
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0048875	MMR_HSR1	PF01926.23	3.8e-07	1	1
MGP_C57BL6NJ_P0048874	MMR_HSR1	PF01926.23	5.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0048875	-	2010	-	MGP_C57BL6NJ_P0048875	243 (aa)	-	-
MGP_C57BL6NJ_T0048874	-	2057	-	MGP_C57BL6NJ_P0048874	291 (aa)	-	P35283
MGP_C57BL6NJ_T0048877	-	381	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0048876	-	629	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0048878	-	669	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0024393's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0024393's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0024393	Rab12	65	37.107	MGP_C57BL6NJ_G0027382	Rab22a	81	37.107
MGP_C57BL6NJ_G0024393	Rab12	75	37.696	MGP_C57BL6NJ_G0036192	Rab33a	68	41.104
MGP_C57BL6NJ_G0024393	Rab12	51	30.597	MGP_C57BL6NJ_G0026151	Arl5a	69	30.597
MGP_C57BL6NJ_G0024393	Rab12	84	37.799	MGP_C57BL6NJ_G0035435	Rab11a	90	43.796
MGP_C57BL6NJ_G0024393	Rab12	86	43.396	MGP_C57BL6NJ_G0020255	Rab15	88	45.213
MGP_C57BL6NJ_G0024393	Rab12	65	30.818	MGP_C57BL6NJ_G0029786	Rheb	85	30.818
MGP_C57BL6NJ_G0024393	Rab12	74	42.308	MGP_C57BL6NJ_G0028452	Rab2a	85	42.308
MGP_C57BL6NJ_G0024393	Rab12	67	35.329	MGP_C57BL6NJ_G0036600	Rab9b	83	35.329
MGP_C57BL6NJ_G0024393	Rab12	64	34.194	MGP_C57BL6NJ_G0022651	Rabl2	67	34.194
MGP_C57BL6NJ_G0024393	Rab12	64	31.210	MGP_C57BL6NJ_G0035663	Mras	80	31.548
MGP_C57BL6NJ_G0024393	Rab12	64	38.462	MGP_C57BL6NJ_G0024384	Rab31	79	38.462
MGP_C57BL6NJ_G0024393	Rab12	70	45.614	MGP_C57BL6NJ_G0030405	Rab35	94	43.455
MGP_C57BL6NJ_G0024393	Rab12	68	42.262	MGP_C57BL6NJ_G0036361	Rab39b	78	42.262
MGP_C57BL6NJ_G0024393	Rab12	74	47.778	MGP_C57BL6NJ_G0032997	Rab30	89	47.253
MGP_C57BL6NJ_G0024393	Rab12	73	33.023	MGP_C57BL6NJ_G0019159	Rab34	77	33.023
MGP_C57BL6NJ_G0024393	Rab12	68	37.278	MGP_C57BL6NJ_G0031441	Rab7	90	48.864
MGP_C57BL6NJ_G0024393	Rab12	51	31.159	MGP_C57BL6NJ_G0025781	Arl5b	68	31.159
MGP_C57BL6NJ_G0024393	Rab12	63	31.373	MGP_C57BL6NJ_G0031923	Kras	87	31.325
MGP_C57BL6NJ_G0024393	Rab12	84	37.073	MGP_C57BL6NJ_G0027819	Rab25	79	40.588
MGP_C57BL6NJ_G0024393	Rab12	79	36.869	MGP_C57BL6NJ_G0027616	Rab33b	83	36.224
MGP_C57BL6NJ_G0024393	Rab12	78	46.561	MGP_C57BL6NJ_G0018457	Rab1a	82	50.296
MGP_C57BL6NJ_G0024393	Rab12	65	40.252	MGP_C57BL6NJ_G0033057	Rab6a	76	40.252
MGP_C57BL6NJ_G0024393	Rab12	83	30.583	MGP_C57BL6NJ_G0036753	Rab9	83	34.132
MGP_C57BL6NJ_G0024393	Rab12	84	37.736	MGP_C57BL6NJ_G0023942	Rab11b	93	44.203
MGP_C57BL6NJ_G0024393	Rab12	70	49.704	MGP_C57BL6NJ_G0025106	Rab1b	84	49.704
MGP_C57BL6NJ_G0024393	Rab12	67	49.697	MGP_C57BL6NJ_G0024539	Rab18	79	49.697
MGP_C57BL6NJ_G0024393	Rab12	86	36.321	MGP_C57BL6NJ_G0026068	Rab14	97	39.726
MGP_C57BL6NJ_G0024393	Rab12	68	35.119	MGP_C57BL6NJ_G0016293	Rab23	69	35.119
MGP_C57BL6NJ_G0024393	Rab12	62	30.464	MGP_C57BL6NJ_G0028104	Nras	97	30.405
MGP_C57BL6NJ_G0024393	Rab12	90	36.000	MGP_C57BL6NJ_G0019558	Rab5c	86	38.806
MGP_C57BL6NJ_G0024393	Rab12	65	39.623	MGP_C57BL6NJ_G0035686	Rab6b	76	39.623
MGP_C57BL6NJ_G0024393	Rab12	82	39.500	MGP_C57BL6NJ_G0021694	Rab2b	80	47.097
MGP_C57BL6NJ_G0024393	Rab12	51	31.250	MGP_C57BL6NJ_G0019440	Arl5c	69	31.250
MGP_C57BL6NJ_G0024393	Rab12	74	37.989	MGP_C57BL6NJ_G0024293	Rab5a	81	37.989
MGP_C57BL6NJ_G0024393	Rab12	66	43.210	MGP_C57BL6NJ_G0019764	Rab37	75	43.210