EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0024463 (Gene tree)
Gene ID: -
Gene Symbol: Dhx57
Alias: AW494914
Full Name: DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 55611 bases
Position: chr17:86183915-86239525
Accession: 2147067
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0049096	zf-CCCH	PF00642.24	3.6e-06	1	1
MGP_C57BL6NJ_P0049097	zf-CCCH	PF00642.24	3.8e-06	1	1
MGP_C57BL6NJ_P0049096	DEAD	PF00270.29	2.3e-10	1	1
MGP_C57BL6NJ_P0049097	DEAD	PF00270.29	2.4e-10	1	1
MGP_C57BL6NJ_P0049096	HA2	PF04408.23	2.6e-17	1	1
MGP_C57BL6NJ_P0049097	HA2	PF04408.23	2.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0049096	-	4918	XM_006523447	MGP_C57BL6NJ_P0049096	1335 (aa)	XP_006523510	Q6P5D3
MGP_C57BL6NJ_T0049097	-	5077	-	MGP_C57BL6NJ_P0049097	1388 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0024463's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0024463's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0024463	Dhx57	50	40.201	MGP_C57BL6NJ_G0019602	Dhx8	51	40.201
MGP_C57BL6NJ_G0024463	Dhx57	50	39.320	MGP_C57BL6NJ_G0034599	Dhx38	50	39.320
MGP_C57BL6NJ_G0024463	Dhx57	50	41.148	MGP_C57BL6NJ_G0027225	Dhx35	89	41.148
MGP_C57BL6NJ_G0024463	Dhx57	65	39.771	MGP_C57BL6NJ_G0021328	Dhx29	59	39.590
MGP_C57BL6NJ_G0024463	Dhx57	63	35.681	MGP_C57BL6NJ_G0017000	Dhx9	54	35.915
MGP_C57BL6NJ_G0024463	Dhx57	69	32.051	MGP_C57BL6NJ_G0035839	Dhx30	62	33.492
MGP_C57BL6NJ_G0024463	Dhx57	55	50.800	MGP_C57BL6NJ_G0024813	Ythdc2	72	36.504
MGP_C57BL6NJ_G0024463	Dhx57	67	41.704	MGP_C57BL6NJ_G0027678	Dhx36	83	41.593