EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0024616 (Gene tree)
Gene ID: -
Gene Symbol: Celf4
Alias: A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik
Full Name: CUGBP%2C Elav-like family member 4
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 295583 bases
Position: chr18:24211538-24507120
Accession: 1932407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0049587	RRM_1	PF00076.22	7.3e-53	1	3
MGP_C57BL6NJ_P0049587	RRM_1	PF00076.22	7.3e-53	2	3
MGP_C57BL6NJ_P0049587	RRM_1	PF00076.22	7.3e-53	3	3
MGP_C57BL6NJ_P0049588	RRM_1	PF00076.22	6.3e-43	1	3
MGP_C57BL6NJ_P0049588	RRM_1	PF00076.22	6.3e-43	2	3
MGP_C57BL6NJ_P0049588	RRM_1	PF00076.22	6.3e-43	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0049588	-	3911	-	MGP_C57BL6NJ_P0049588	484 (aa)	-	-
MGP_C57BL6NJ_T0049586	-	3499	XM_006525504	MGP_C57BL6NJ_P0049586	453 (aa)	XP_006525571	Q7TSY6
MGP_C57BL6NJ_T0049587	-	3971	-	MGP_C57BL6NJ_P0049587	504 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0024616's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0024616's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0024616	Celf4	97	65.795	MGP_C57BL6NJ_G0017954	Celf5	93	76.842
MGP_C57BL6NJ_G0024616	Celf4	57	37.500	MGP_C57BL6NJ_G0029162	Pabpc4	51	37.500
MGP_C57BL6NJ_G0024616	Celf4	91	35.802	MGP_C57BL6NJ_G0028998	Elavl4	88	38.272
MGP_C57BL6NJ_G0024616	Celf4	91	37.037	MGP_C57BL6NJ_G0028865	Elavl2	88	39.506
MGP_C57BL6NJ_G0024616	Celf4	73	36.232	MGP_C57BL6NJ_G0033826	Elavl1	95	43.210
MGP_C57BL6NJ_G0024616	Celf4	68	40.789	MGP_C57BL6NJ_G0035900	Rbms3	72	40.789
MGP_C57BL6NJ_G0024616	Celf4	61	32.110	MGP_C57BL6NJ_G0028476	-	61	36.364
MGP_C57BL6NJ_G0024616	Celf4	97	65.971	MGP_C57BL6NJ_G0027972	Celf3	100	69.072
MGP_C57BL6NJ_G0024616	Celf4	63	30.682	MGP_C57BL6NJ_G0031411	Tia1	87	32.911
MGP_C57BL6NJ_G0024616	Celf4	100	42.430	MGP_C57BL6NJ_G0026558	Celf1	100	45.200
MGP_C57BL6NJ_G0024616	Celf4	62	36.842	MGP_C57BL6NJ_G0023550	Pabpc6	62	36.842
MGP_C57BL6NJ_G0024616	Celf4	95	46.304	MGP_C57BL6NJ_G0025747	Celf2	90	55.556
MGP_C57BL6NJ_G0024616	Celf4	99	67.066	MGP_C57BL6NJ_G0035394	Celf6	100	67.200
MGP_C57BL6NJ_G0024616	Celf4	67	39.744	MGP_C57BL6NJ_G0034964	Elavl3	73	39.506