EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0024657 (Gene tree)
Gene ID: -
Gene Symbol: Gm3550
Alias: -
Full Name: predicted gene 3550
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 1444 bases
Position: chr18:34241103-34242546
Accession: 3781727
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0049681	Ribosomal_L29e	PF01779.17	5.2e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0049681	-	1444	-	MGP_C57BL6NJ_P0049681	129 (aa)	-	W4VSN7

Gene Model

Click here to download MGP_C57BL6NJ_G0024657's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0024657's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0024657	Gm3550	98	91.406	MGP_C57BL6NJ_G0034026	-	86	91.406
MGP_C57BL6NJ_G0024657	Gm3550	96	89.516	MGP_C57BL6NJ_G0022524	Gm5218	82	89.764
MGP_C57BL6NJ_G0024657	Gm3550	53	84.058	MGP_C57BL6NJ_G0035721	-	78	84.058