EuRBPDB

Description

Ensembl ID: MGP_C57BL6NJ_G0024687 (Gene tree)
Gene ID: -
Gene Symbol: Ankhd1
Alias: 1110004O12Rik|4933432B13Rik|9130019P20Rik|A530027J04Rik|A630021B20Rik|AA571404|Mask|mFLJ00246|mKIAA1085
Full Name: ankyrin repeat and KH domain containing 1
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 118603 bases
Position: chr18:36185454-36304056
Accession: 1921733
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0049780	KH_1	PF00013.29	1.9e-14	1	1
MGP_C57BL6NJ_P0049771	KH_1	PF00013.29	4.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0049780	-	3518	-	MGP_C57BL6NJ_P0049780	1020 (aa)	-	-
MGP_C57BL6NJ_T0049781	-	2235	-	MGP_C57BL6NJ_P0049781	636 (aa)	-	-
MGP_C57BL6NJ_T0049782	-	860	-	MGP_C57BL6NJ_P0049782	168 (aa)	-	-
MGP_C57BL6NJ_T0049779	-	500	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0049778	-	523	-	MGP_C57BL6NJ_P0049778	90 (aa)	-	-
MGP_C57BL6NJ_T0049769	-	641	-	MGP_C57BL6NJ_P0049769	213 (aa)	-	E9PUR0
MGP_C57BL6NJ_T0049775	-	658	-	MGP_C57BL6NJ_P0049775	218 (aa)	-	-
MGP_C57BL6NJ_T0049774	-	1033	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0049777	-	603	-	MGP_C57BL6NJ_P0049777	110 (aa)	-	-
MGP_C57BL6NJ_T0049776	-	610	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0049771	-	8466	-	MGP_C57BL6NJ_P0049771	2629 (aa)	-	-
MGP_C57BL6NJ_T0049770	-	8200	-	MGP_C57BL6NJ_P0049770	2485 (aa)	-	-
MGP_C57BL6NJ_T0049773	-	1005	-	MGP_C57BL6NJ_P0049773	334 (aa)	-	-
MGP_C57BL6NJ_T0049772	-	8235	-	MGP_C57BL6NJ_P0049772	2485 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0024687	Ankhd1	76	89.507	MGP_C57BL6NJ_G0030149	Ankrd17	87	89.358