EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0025011 (Gene tree)
Gene ID: -
Gene Symbol: Sall3
Alias: B130022O04Rik|Msal|Msal-1|Sal|Salt|Spalt
Full Name: sal-like 3 (Drosophila)
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 22344 bases
Position: chr18:83985440-84007783
Accession: 109295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0050635	zf-C2H2	PF00096.26	8.1e-25	1	5
MGP_C57BL6NJ_P0050635	zf-C2H2	PF00096.26	8.1e-25	2	5
MGP_C57BL6NJ_P0050635	zf-C2H2	PF00096.26	8.1e-25	3	5
MGP_C57BL6NJ_P0050635	zf-C2H2	PF00096.26	8.1e-25	4	5
MGP_C57BL6NJ_P0050635	zf-C2H2	PF00096.26	8.1e-25	5	5
MGP_C57BL6NJ_P0050635	zf-met	PF12874.7	4.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0050635	-	6886	XM_006526459	MGP_C57BL6NJ_P0050635	1248 (aa)	XP_006526522	Q62255

Gene Model

Click here to download MGP_C57BL6NJ_G0025011's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0025011's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0025011	Sall3	66	65.385	MGP_C57BL6NJ_G0027352	Sall4	98	84.507
MGP_C57BL6NJ_G0025011	Sall3	99	65.306	MGP_C57BL6NJ_G0034420	Sall1	99	65.306