EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0025014 (Gene tree)
Gene ID: -
Gene Symbol: Zfp236
Alias: AI447957|Gm335|LOC240456
Full Name: zinc finger protein 236
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 122644 bases
Position: chr18:85698167-85820810
Accession: 1926950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0050656	zf-C2H2	PF00096.26	1e-110	1	19
MGP_C57BL6NJ_P0050656	zf-C2H2	PF00096.26	1e-110	2	19
MGP_C57BL6NJ_P0050656	zf-C2H2	PF00096.26	1e-110	3	19
MGP_C57BL6NJ_P0050656	zf-C2H2	PF00096.26	1e-110	4	19
MGP_C57BL6NJ_P0050656	zf-C2H2	PF00096.26	1e-110	5	19
MGP_C57BL6NJ_P0050656	zf-C2H2	PF00096.26	1e-110	6	19
MGP_C57BL6NJ_P0050656	zf-C2H2	PF00096.26	1e-110	7	19
MGP_C57BL6NJ_P0050656	zf-C2H2	PF00096.26	1e-110	8	19
MGP_C57BL6NJ_P0050656	zf-C2H2	PF00096.26	1e-110	9	19
MGP_C57BL6NJ_P0050656	zf-C2H2	PF00096.26	1e-110	10	19
MGP_C57BL6NJ_P0050656	zf-C2H2	PF00096.26	1e-110	11	19
MGP_C57BL6NJ_P0050656	zf-C2H2	PF00096.26	1e-110	12	19
MGP_C57BL6NJ_P0050656	zf-C2H2	PF00096.26	1e-110	13	19
MGP_C57BL6NJ_P0050656	zf-C2H2	PF00096.26	1e-110	14	19
MGP_C57BL6NJ_P0050656	zf-C2H2	PF00096.26	1e-110	15	19
MGP_C57BL6NJ_P0050656	zf-C2H2	PF00096.26	1e-110	16	19
MGP_C57BL6NJ_P0050656	zf-C2H2	PF00096.26	1e-110	17	19
MGP_C57BL6NJ_P0050656	zf-C2H2	PF00096.26	1e-110	18	19
MGP_C57BL6NJ_P0050656	zf-C2H2	PF00096.26	1e-110	19	19
MGP_C57BL6NJ_P0050653	zf-C2H2	PF00096.26	5.1e-108	1	18
MGP_C57BL6NJ_P0050653	zf-C2H2	PF00096.26	5.1e-108	2	18
MGP_C57BL6NJ_P0050653	zf-C2H2	PF00096.26	5.1e-108	3	18
MGP_C57BL6NJ_P0050653	zf-C2H2	PF00096.26	5.1e-108	4	18
MGP_C57BL6NJ_P0050653	zf-C2H2	PF00096.26	5.1e-108	5	18
MGP_C57BL6NJ_P0050653	zf-C2H2	PF00096.26	5.1e-108	6	18
MGP_C57BL6NJ_P0050653	zf-C2H2	PF00096.26	5.1e-108	7	18
MGP_C57BL6NJ_P0050653	zf-C2H2	PF00096.26	5.1e-108	8	18
MGP_C57BL6NJ_P0050653	zf-C2H2	PF00096.26	5.1e-108	9	18
MGP_C57BL6NJ_P0050653	zf-C2H2	PF00096.26	5.1e-108	10	18
MGP_C57BL6NJ_P0050653	zf-C2H2	PF00096.26	5.1e-108	11	18
MGP_C57BL6NJ_P0050653	zf-C2H2	PF00096.26	5.1e-108	12	18
MGP_C57BL6NJ_P0050653	zf-C2H2	PF00096.26	5.1e-108	13	18
MGP_C57BL6NJ_P0050653	zf-C2H2	PF00096.26	5.1e-108	14	18
MGP_C57BL6NJ_P0050653	zf-C2H2	PF00096.26	5.1e-108	15	18
MGP_C57BL6NJ_P0050653	zf-C2H2	PF00096.26	5.1e-108	16	18
MGP_C57BL6NJ_P0050653	zf-C2H2	PF00096.26	5.1e-108	17	18
MGP_C57BL6NJ_P0050653	zf-C2H2	PF00096.26	5.1e-108	18	18
MGP_C57BL6NJ_P0050658	zf-C2H2	PF00096.26	6.9e-06	1	1
MGP_C57BL6NJ_P0050653	zf-met	PF12874.7	5.4e-06	1	4
MGP_C57BL6NJ_P0050653	zf-met	PF12874.7	5.4e-06	2	4
MGP_C57BL6NJ_P0050653	zf-met	PF12874.7	5.4e-06	3	4
MGP_C57BL6NJ_P0050653	zf-met	PF12874.7	5.4e-06	4	4
MGP_C57BL6NJ_P0050656	zf-met	PF12874.7	3.1e-05	1	4
MGP_C57BL6NJ_P0050656	zf-met	PF12874.7	3.1e-05	2	4
MGP_C57BL6NJ_P0050656	zf-met	PF12874.7	3.1e-05	3	4
MGP_C57BL6NJ_P0050656	zf-met	PF12874.7	3.1e-05	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0050658	-	410	-	MGP_C57BL6NJ_P0050658	65 (aa)	-	-
MGP_C57BL6NJ_T0050654	-	3227	-	MGP_C57BL6NJ_P0050654	42 (aa)	-	-
MGP_C57BL6NJ_T0050655	-	6099	-	MGP_C57BL6NJ_P0050655	473 (aa)	-	-
MGP_C57BL6NJ_T0050656	-	5676	-	MGP_C57BL6NJ_P0050656	1840 (aa)	-	-
MGP_C57BL6NJ_T0050657	-	665	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0050653	-	9631	XM_006526490	MGP_C57BL6NJ_P0050653	1792 (aa)	XP_006526553	B2RR24

Gene Model

Click here to download MGP_C57BL6NJ_G0025014's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0025014's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0025014	Zfp236	73	43.636	MGP_C57BL6NJ_G0021105	Zfp748	92	41.905
MGP_C57BL6NJ_G0025014	Zfp236	66	48.864	MGP_C57BL6NJ_G0027540	Mynn	62	48.864
MGP_C57BL6NJ_G0025014	Zfp236	75	34.940	MGP_C57BL6NJ_G0033552	Zfp646	90	34.940
MGP_C57BL6NJ_G0025014	Zfp236	69	41.121	MGP_C57BL6NJ_G0034262	Zfp882	87	45.652
MGP_C57BL6NJ_G0025014	Zfp236	69	42.647	MGP_C57BL6NJ_G0032271	Zfp94	76	42.647
MGP_C57BL6NJ_G0025014	Zfp236	79	46.512	MGP_C57BL6NJ_G0032439	Zfp420	99	46.512
MGP_C57BL6NJ_G0025014	Zfp236	60	46.591	MGP_C57BL6NJ_G0021087	Rslcan18	70	45.283
MGP_C57BL6NJ_G0025014	Zfp236	88	31.818	MGP_C57BL6NJ_G0017570	Zbtb24	54	45.794
MGP_C57BL6NJ_G0025014	Zfp236	70	46.296	MGP_C57BL6NJ_G0034908	Zfp26	70	46.364
MGP_C57BL6NJ_G0025014	Zfp236	59	36.242	MGP_C57BL6NJ_G0034720	Snai3	67	47.297
MGP_C57BL6NJ_G0025014	Zfp236	68	44.545	MGP_C57BL6NJ_G0027315	Zfp334	68	44.545
MGP_C57BL6NJ_G0025014	Zfp236	77	37.143	MGP_C57BL6NJ_G0023666	Zscan10	99	37.143
MGP_C57BL6NJ_G0025014	Zfp236	60	45.652	MGP_C57BL6NJ_G0034637	Zfp1	67	45.652
MGP_C57BL6NJ_G0025014	Zfp236	78	36.471	MGP_C57BL6NJ_G0018741	Zfp672	96	41.096
MGP_C57BL6NJ_G0025014	Zfp236	68	46.667	MGP_C57BL6NJ_G0032267	Zfp111	77	46.667
MGP_C57BL6NJ_G0025014	Zfp236	70	43.411	MGP_C57BL6NJ_G0032266	Zfp235	66	43.411
MGP_C57BL6NJ_G0025014	Zfp236	69	39.806	MGP_C57BL6NJ_G0032265	Zfp112	52	42.742
MGP_C57BL6NJ_G0025014	Zfp236	69	50.000	MGP_C57BL6NJ_G0034261	Zfp709	86	43.750
MGP_C57BL6NJ_G0025014	Zfp236	58	48.780	MGP_C57BL6NJ_G0033526	Zfp768	53	45.536
MGP_C57BL6NJ_G0025014	Zfp236	64	47.297	MGP_C57BL6NJ_G0033529	Zfp747	86	47.297
MGP_C57BL6NJ_G0025014	Zfp236	58	42.177	MGP_C57BL6NJ_G0033528	E430018J23Rik	58	42.177
MGP_C57BL6NJ_G0025014	Zfp236	75	45.283	MGP_C57BL6NJ_G0023637	Zfp51	76	45.283
MGP_C57BL6NJ_G0025014	Zfp236	71	40.449	MGP_C57BL6NJ_G0023635	Zfp677	85	45.455
MGP_C57BL6NJ_G0025014	Zfp236	63	44.068	MGP_C57BL6NJ_G0032270	Zfp61	57	42.857
MGP_C57BL6NJ_G0025014	Zfp236	80	44.304	MGP_C57BL6NJ_G0031136	Repin1	99	41.667
MGP_C57BL6NJ_G0025014	Zfp236	64	48.148	MGP_C57BL6NJ_G0018653	Zfp354a	89	47.312
MGP_C57BL6NJ_G0025014	Zfp236	64	45.455	MGP_C57BL6NJ_G0031616	Zfp637	85	51.807
MGP_C57BL6NJ_G0025014	Zfp236	67	36.782	MGP_C57BL6NJ_G0016956	Zbtb41	61	38.824
MGP_C57BL6NJ_G0025014	Zfp236	79	38.732	MGP_C57BL6NJ_G0023659	Zfp945	79	40.000
MGP_C57BL6NJ_G0025014	Zfp236	60	46.512	MGP_C57BL6NJ_G0020666	Zkscan4	60	46.512
MGP_C57BL6NJ_G0025014	Zfp236	78	40.690	MGP_C57BL6NJ_G0034479	Zfp319	87	40.690
MGP_C57BL6NJ_G0025014	Zfp236	68	43.860	MGP_C57BL6NJ_G0031270	Prdm5	86	46.739
MGP_C57BL6NJ_G0025014	Zfp236	60	44.318	MGP_C57BL6NJ_G0034971	Zfp872	94	40.800
MGP_C57BL6NJ_G0025014	Zfp236	64	42.500	MGP_C57BL6NJ_G0032301	Zfp574	95	41.304
MGP_C57BL6NJ_G0025014	Zfp236	74	42.857	MGP_C57BL6NJ_G0032591	Zfp715	69	40.816
MGP_C57BL6NJ_G0025014	Zfp236	59	41.748	MGP_C57BL6NJ_G0019380	Zfp652	60	41.748
MGP_C57BL6NJ_G0025014	Zfp236	69	42.727	MGP_C57BL6NJ_G0029473	Zbtb17	58	42.727
MGP_C57BL6NJ_G0025014	Zfp236	63	42.697	MGP_C57BL6NJ_G0018644	Zfp454	76	42.982
MGP_C57BL6NJ_G0025014	Zfp236	77	40.000	MGP_C57BL6NJ_G0018791	Zfp867	94	45.902
MGP_C57BL6NJ_G0025014	Zfp236	59	41.096	MGP_C57BL6NJ_G0032011	Zfp628	61	42.500
MGP_C57BL6NJ_G0025014	Zfp236	68	40.260	MGP_C57BL6NJ_G0032019	Zfp865	78	44.643
MGP_C57BL6NJ_G0025014	Zfp236	79	35.772	MGP_C57BL6NJ_G0030303	4930522L14Rik	99	39.823
MGP_C57BL6NJ_G0025014	Zfp236	54	46.739	MGP_C57BL6NJ_G0030274	Gfi1	100	46.739
MGP_C57BL6NJ_G0025014	Zfp236	69	40.559	MGP_C57BL6NJ_G0022420	Zfp251	79	40.559
MGP_C57BL6NJ_G0025014	Zfp236	78	41.667	MGP_C57BL6NJ_G0027353	Zfp64	70	42.500
MGP_C57BL6NJ_G0025014	Zfp236	81	53.333	MGP_C57BL6NJ_G0027352	Sall4	73	53.333
MGP_C57BL6NJ_G0025014	Zfp236	80	43.902	MGP_C57BL6NJ_G0021088	Zfp759	97	41.837
MGP_C57BL6NJ_G0025014	Zfp236	62	43.023	MGP_C57BL6NJ_G0029938	Zbtb49	62	47.887