EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0025084 (Gene tree)
Gene ID: -
Gene Symbol: Gm21992
Alias: Rbm14|Rbm14-rbm4|Rbm4 fusionGN
Full Name: predicted gene 21992
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 77827 bases
Position: chr19:1684568-1762394
Accession: 5439461
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0050915	zf-CCHC	PF00098.23	2.9e-07	1	1
MGP_C57BL6NJ_P0050919	zf-CCHC	PF00098.23	4.1e-07	1	1
MGP_C57BL6NJ_P0050919	RRM_5	PF13893.6	6.2e-13	1	3
MGP_C57BL6NJ_P0050919	RRM_5	PF13893.6	6.2e-13	2	3
MGP_C57BL6NJ_P0050919	RRM_5	PF13893.6	6.2e-13	3	3
MGP_C57BL6NJ_P0050919	RRM_1	PF00076.22	4.7e-54	1	4
MGP_C57BL6NJ_P0050919	RRM_1	PF00076.22	4.7e-54	2	4
MGP_C57BL6NJ_P0050919	RRM_1	PF00076.22	4.7e-54	3	4
MGP_C57BL6NJ_P0050919	RRM_1	PF00076.22	4.7e-54	4	4
MGP_C57BL6NJ_P0050915	RRM_1	PF00076.22	9.8e-18	1	2
MGP_C57BL6NJ_P0050915	RRM_1	PF00076.22	9.8e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0050916	-	456	-	MGP_C57BL6NJ_P0050916	19 (aa)	-	-
MGP_C57BL6NJ_T0050915	-	1435	-	MGP_C57BL6NJ_P0050915	336 (aa)	-	-
MGP_C57BL6NJ_T0050906	-	2590	-	MGP_C57BL6NJ_P0050906	118 (aa)	-	B0LM42
MGP_C57BL6NJ_T0050919	-	1434	-	MGP_C57BL6NJ_P0050919	477 (aa)	-	-
MGP_C57BL6NJ_T0050923	-	2432	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0050924	-	556	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0025084's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0025084's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0025084	Gm21992	100	85.873	MGP_C57BL6NJ_G0025085	Rbm4b	91	99.281
MGP_C57BL6NJ_G0025084	Gm21992	100	100.000	MGP_C57BL6NJ_G0025086	Rbm4	100	100.000
MGP_C57BL6NJ_G0025084	Gm21992	100	96.610	MGP_C57BL6NJ_G0025087	Rbm14	97	99.130
MGP_C57BL6NJ_G0025084	Gm21992	90	31.061	MGP_C57BL6NJ_G0017886	Dazap1	78	30.147