EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0025085 (Gene tree)
Gene ID: -
Gene Symbol: Rbm4b
Alias: 4921506I22Rik|AI504630|AI506404|Lark2|Neosin|Rbm30
Full Name: RNA binding motif protein 4B
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 13981 bases
Position: chr19:1698198-1712178
Accession: 1913954
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0050910	zf-CCHC	PF00098.23	3.2e-07	1	1
MGP_C57BL6NJ_P0050910	RRM_5	PF13893.6	3.6e-08	1	2
MGP_C57BL6NJ_P0050910	RRM_5	PF13893.6	3.6e-08	2	2
MGP_C57BL6NJ_P0050910	RRM_1	PF00076.22	1.3e-34	1	2
MGP_C57BL6NJ_P0050910	RRM_1	PF00076.22	1.3e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0050913	-	407	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0050912	-	5670	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0050911	-	3109	-	MGP_C57BL6NJ_P0050911	152 (aa)	-	-
MGP_C57BL6NJ_T0050910	-	1783	-	MGP_C57BL6NJ_P0050910	357 (aa)	-	-
MGP_C57BL6NJ_T0050908	-	1207	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0050909	-	4178	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0050907	-	1443	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0025085's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0025085's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0025085	Rbm4b	91	99.281	MGP_C57BL6NJ_G0025084	Gm21992	100	85.873
MGP_C57BL6NJ_G0025085	Rbm4b	91	44.286	MGP_C57BL6NJ_G0025087	Rbm14	94	41.964
MGP_C57BL6NJ_G0025085	Rbm4b	94	97.203	MGP_C57BL6NJ_G0025086	Rbm4	100	100.000
MGP_C57BL6NJ_G0025085	Rbm4b	95	30.488	MGP_C57BL6NJ_G0031411	Tia1	85	30.488
MGP_C57BL6NJ_G0025085	Rbm4b	72	33.036	MGP_C57BL6NJ_G0021799	Pspc1	95	35.484
MGP_C57BL6NJ_G0025085	Rbm4b	92	30.345	MGP_C57BL6NJ_G0033576	Tial1	84	30.088
MGP_C57BL6NJ_G0025085	Rbm4b	51	31.765	MGP_C57BL6NJ_G0036247	Rbmx	83	31.765