EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0025222 (Gene tree)
Gene ID: -
Gene Symbol: Nxf1
Alias: 0610006I08Rik|Mex67|Mvb1|TAP|Tap|Tip associated protein
Full Name: nuclear RNA export factor 1
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 20143 bases
Position: chr19:6149992-6170134
Accession: 1858330
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0051409	Tap-RNA_bind	PF09162.10	1.8e-38	1	1
MGP_C57BL6NJ_P0051411	Tap-RNA_bind	PF09162.10	1.1e-22	1	1
MGP_C57BL6NJ_P0051417	TAP_C	PF03943.13	7.2e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0051419	-	474	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0051418	-	431	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0051409	-	5444	-	MGP_C57BL6NJ_P0051409	418 (aa)	-	Q99JX7
MGP_C57BL6NJ_T0051415	-	927	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0051414	-	236	-	MGP_C57BL6NJ_P0051414	78 (aa)	-	-
MGP_C57BL6NJ_T0051417	-	505	-	MGP_C57BL6NJ_P0051417	88 (aa)	-	-
MGP_C57BL6NJ_T0051416	-	519	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0051411	-	1017	-	MGP_C57BL6NJ_P0051411	282 (aa)	-	-
MGP_C57BL6NJ_T0051410	-	590	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0051413	-	2800	-	MGP_C57BL6NJ_P0051413	618 (aa)	-	-
MGP_C57BL6NJ_T0051412	-	567	-	MGP_C57BL6NJ_P0051412	75 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0025222's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0025222's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0025222	Nxf1	91	58.750	MGP_C57BL6NJ_G0036573	Nxf2	82	54.887
MGP_C57BL6NJ_G0025222	Nxf1	91	38.475	MGP_C57BL6NJ_G0036585	Nxf3	91	38.475
MGP_C57BL6NJ_G0025222	Nxf1	93	56.098	MGP_C57BL6NJ_G0036575	Nxf7	99	46.943