EuRBPDB

Description

Ensembl ID: MGP_C57BL6NJ_G0025422 (Gene tree)
Gene ID: -
Gene Symbol: Smarca2
Alias: 2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 191447 bases
Position: chr19:25651828-25843274
Accession: 99603
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0051848	ResIII	PF04851.15	3.9e-08	1	1
MGP_C57BL6NJ_P0051849	ResIII	PF04851.15	4e-08	1	1
MGP_C57BL6NJ_P0051852	BRK	PF07533.16	3.6e-17	1	1
MGP_C57BL6NJ_P0051848	BRK	PF07533.16	3.7e-17	1	1
MGP_C57BL6NJ_P0051849	BRK	PF07533.16	3.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0051859	-	942	-	MGP_C57BL6NJ_P0051859	254 (aa)	-	-
MGP_C57BL6NJ_T0051858	-	929	-	MGP_C57BL6NJ_P0051858	254 (aa)	-	-
MGP_C57BL6NJ_T0051848	-	5858	XM_006527281	MGP_C57BL6NJ_P0051848	1583 (aa)	XP_006527344	A0A140LHE2
MGP_C57BL6NJ_T0051849	-	5862	-	MGP_C57BL6NJ_P0051849	1601 (aa)	-	-
MGP_C57BL6NJ_T0051855	-	1584	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0051854	-	661	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0051857	-	426	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0051856	-	867	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0051851	-	5997	-	MGP_C57BL6NJ_P0051851	1592 (aa)	-	-
MGP_C57BL6NJ_T0051850	-	5913	-	MGP_C57BL6NJ_P0051850	1510 (aa)	-	-
MGP_C57BL6NJ_T0051853	-	645	-	MGP_C57BL6NJ_P0051853	173 (aa)	-	-
MGP_C57BL6NJ_T0051852	-	4578	-	MGP_C57BL6NJ_P0051852	1525 (aa)	-	-
MGP_C57BL6NJ_T0051864	-	494	-	MGP_C57BL6NJ_P0051864	83 (aa)	-	-
MGP_C57BL6NJ_T0051865	-	1460	-	MGP_C57BL6NJ_P0051865	113 (aa)	-	-
MGP_C57BL6NJ_T0051866	-	968	-	MGP_C57BL6NJ_P0051866	119 (aa)	-	-
MGP_C57BL6NJ_T0051867	-	736	-	MGP_C57BL6NJ_P0051867	119 (aa)	-	-
MGP_C57BL6NJ_T0051860	-	788	-	MGP_C57BL6NJ_P0051860	224 (aa)	-	-
MGP_C57BL6NJ_T0051861	-	879	-	MGP_C57BL6NJ_P0051861	276 (aa)	-	-
MGP_C57BL6NJ_T0051862	-	1858	-	MGP_C57BL6NJ_P0051862	236 (aa)	-	-
MGP_C57BL6NJ_T0051863	-	835	-	MGP_C57BL6NJ_P0051863	235 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0025422	Smarca2	92	75.520	MGP_C57BL6NJ_G0034949	Smarca4	92	79.726