EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0025747 (Gene tree)
Gene ID: -
Gene Symbol: Celf2
Alias: B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|ETR-3|Etr-3|Napor|Napor-2|mETR-3
Full Name: CUGBP%2C Elav-like family member 2
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 1033238 bases
Position: chr2:3819230-4852467
Accession: 1338822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0052899	RRM_1	PF00076.22	2.6e-51	1	3
MGP_C57BL6NJ_P0052899	RRM_1	PF00076.22	2.6e-51	2	3
MGP_C57BL6NJ_P0052899	RRM_1	PF00076.22	2.6e-51	3	3
MGP_C57BL6NJ_P0052902	RRM_1	PF00076.22	2.6e-51	1	3
MGP_C57BL6NJ_P0052902	RRM_1	PF00076.22	2.6e-51	2	3
MGP_C57BL6NJ_P0052902	RRM_1	PF00076.22	2.6e-51	3	3
MGP_C57BL6NJ_P0052908	RRM_1	PF00076.22	2.6e-51	1	3
MGP_C57BL6NJ_P0052908	RRM_1	PF00076.22	2.6e-51	2	3
MGP_C57BL6NJ_P0052908	RRM_1	PF00076.22	2.6e-51	3	3
MGP_C57BL6NJ_P0052909	RRM_1	PF00076.22	2.6e-51	1	3
MGP_C57BL6NJ_P0052909	RRM_1	PF00076.22	2.6e-51	2	3
MGP_C57BL6NJ_P0052909	RRM_1	PF00076.22	2.6e-51	3	3
MGP_C57BL6NJ_P0052910	RRM_1	PF00076.22	2.7e-51	1	3
MGP_C57BL6NJ_P0052910	RRM_1	PF00076.22	2.7e-51	2	3
MGP_C57BL6NJ_P0052910	RRM_1	PF00076.22	2.7e-51	3	3
MGP_C57BL6NJ_P0052905	RRM_1	PF00076.22	3.1e-51	1	3
MGP_C57BL6NJ_P0052905	RRM_1	PF00076.22	3.1e-51	2	3
MGP_C57BL6NJ_P0052905	RRM_1	PF00076.22	3.1e-51	3	3
MGP_C57BL6NJ_P0052901	RRM_1	PF00076.22	3.3e-51	1	3
MGP_C57BL6NJ_P0052901	RRM_1	PF00076.22	3.3e-51	2	3
MGP_C57BL6NJ_P0052901	RRM_1	PF00076.22	3.3e-51	3	3
MGP_C57BL6NJ_P0052903	RRM_1	PF00076.22	3.3e-51	1	3
MGP_C57BL6NJ_P0052903	RRM_1	PF00076.22	3.3e-51	2	3
MGP_C57BL6NJ_P0052903	RRM_1	PF00076.22	3.3e-51	3	3
MGP_C57BL6NJ_P0052907	RRM_1	PF00076.22	3.4e-51	1	3
MGP_C57BL6NJ_P0052907	RRM_1	PF00076.22	3.4e-51	2	3
MGP_C57BL6NJ_P0052907	RRM_1	PF00076.22	3.4e-51	3	3
MGP_C57BL6NJ_P0052906	RRM_1	PF00076.22	4.9e-39	1	3
MGP_C57BL6NJ_P0052906	RRM_1	PF00076.22	4.9e-39	2	3
MGP_C57BL6NJ_P0052906	RRM_1	PF00076.22	4.9e-39	3	3
MGP_C57BL6NJ_P0052911	RRM_1	PF00076.22	5.9e-39	1	3
MGP_C57BL6NJ_P0052911	RRM_1	PF00076.22	5.9e-39	2	3
MGP_C57BL6NJ_P0052911	RRM_1	PF00076.22	5.9e-39	3	3
MGP_C57BL6NJ_P0052900	RRM_1	PF00076.22	6.2e-39	1	3
MGP_C57BL6NJ_P0052900	RRM_1	PF00076.22	6.2e-39	2	3
MGP_C57BL6NJ_P0052900	RRM_1	PF00076.22	6.2e-39	3	3
MGP_C57BL6NJ_P0052904	RRM_1	PF00076.22	6.6e-39	1	3
MGP_C57BL6NJ_P0052904	RRM_1	PF00076.22	6.6e-39	2	3
MGP_C57BL6NJ_P0052904	RRM_1	PF00076.22	6.6e-39	3	3
MGP_C57BL6NJ_P0052918	RRM_1	PF00076.22	7.5e-19	1	1
MGP_C57BL6NJ_P0052914	RRM_1	PF00076.22	2.4e-15	1	1
MGP_C57BL6NJ_P0052921	RRM_1	PF00076.22	2.2e-14	1	1
MGP_C57BL6NJ_P0052923	RRM_1	PF00076.22	1.1e-13	1	1
MGP_C57BL6NJ_P0052924	RRM_1	PF00076.22	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0052908	-	1721	-	MGP_C57BL6NJ_P0052908	488 (aa)	-	-
MGP_C57BL6NJ_T0052909	-	2342	-	MGP_C57BL6NJ_P0052909	488 (aa)	-	-
MGP_C57BL6NJ_T0052906	-	2223	-	MGP_C57BL6NJ_P0052906	440 (aa)	-	-
MGP_C57BL6NJ_T0052907	-	2525	-	MGP_C57BL6NJ_P0052907	520 (aa)	-	-
MGP_C57BL6NJ_T0052904	-	3853	-	MGP_C57BL6NJ_P0052904	472 (aa)	-	-
MGP_C57BL6NJ_T0052905	-	3597	-	MGP_C57BL6NJ_P0052905	508 (aa)	-	-
MGP_C57BL6NJ_T0052902	-	7483	-	MGP_C57BL6NJ_P0052902	484 (aa)	-	-
MGP_C57BL6NJ_T0052903	-	5469	-	MGP_C57BL6NJ_P0052903	526 (aa)	-	-
MGP_C57BL6NJ_T0052900	-	8858	-	MGP_C57BL6NJ_P0052900	478 (aa)	-	-
MGP_C57BL6NJ_T0052901	-	8740	-	MGP_C57BL6NJ_P0052901	526 (aa)	-	-
MGP_C57BL6NJ_T0052924	-	331	-	MGP_C57BL6NJ_P0052924	46 (aa)	-	-
MGP_C57BL6NJ_T0052925	-	1972	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0052926	-	769	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0052920	-	2075	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0052921	-	402	-	MGP_C57BL6NJ_P0052921	92 (aa)	-	-
MGP_C57BL6NJ_T0052922	-	4143	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0052923	-	529	-	MGP_C57BL6NJ_P0052923	159 (aa)	-	-
MGP_C57BL6NJ_T0052919	-	4802	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0052918	-	630	-	MGP_C57BL6NJ_P0052918	134 (aa)	-	-
MGP_C57BL6NJ_T0052915	-	4798	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0052914	-	1024	-	MGP_C57BL6NJ_P0052914	276 (aa)	-	-
MGP_C57BL6NJ_T0052917	-	923	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0052916	-	405	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0052911	-	2187	-	MGP_C57BL6NJ_P0052911	460 (aa)	-	-
MGP_C57BL6NJ_T0052910	-	2348	-	MGP_C57BL6NJ_P0052910	490 (aa)	-	-
MGP_C57BL6NJ_T0052913	-	1240	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0052912	-	1996	-	MGP_C57BL6NJ_P0052912	443 (aa)	-	-
MGP_C57BL6NJ_T0052899	-	7710	XM_006497333	MGP_C57BL6NJ_P0052899	484 (aa)	XP_006497396	Q9Z0H4

Gene Model

Click here to download MGP_C57BL6NJ_G0025747's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0025747's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0025747	Celf2	51	35.443	MGP_C57BL6NJ_G0031411	Tia1	83	35.443
MGP_C57BL6NJ_G0025747	Celf2	94	83.333	MGP_C57BL6NJ_G0027972	Celf3	100	46.402
MGP_C57BL6NJ_G0025747	Celf2	88	32.099	MGP_C57BL6NJ_G0036247	Rbmx	78	30.000
MGP_C57BL6NJ_G0025747	Celf2	77	39.474	MGP_C57BL6NJ_G0018243	Rbms2	51	39.474
MGP_C57BL6NJ_G0025747	Celf2	61	38.272	MGP_C57BL6NJ_G0028998	Elavl4	81	38.272
MGP_C57BL6NJ_G0025747	Celf2	87	33.333	MGP_C57BL6NJ_G0028865	Elavl2	83	39.506
MGP_C57BL6NJ_G0025747	Celf2	61	35.714	MGP_C57BL6NJ_G0016426	Boll	57	32.000
MGP_C57BL6NJ_G0025747	Celf2	82	34.667	MGP_C57BL6NJ_G0034964	Elavl3	76	40.741
MGP_C57BL6NJ_G0025747	Celf2	100	88.060	MGP_C57BL6NJ_G0026558	Celf1	100	80.082
MGP_C57BL6NJ_G0025747	Celf2	79	80.952	MGP_C57BL6NJ_G0035394	Celf6	91	45.567
MGP_C57BL6NJ_G0025747	Celf2	59	37.500	MGP_C57BL6NJ_G0029162	Pabpc4	51	37.500
MGP_C57BL6NJ_G0025747	Celf2	90	55.556	MGP_C57BL6NJ_G0024616	Celf4	95	46.304
MGP_C57BL6NJ_G0025747	Celf2	61	34.177	MGP_C57BL6NJ_G0033576	Tial1	65	31.481
MGP_C57BL6NJ_G0025747	Celf2	82	33.333	MGP_C57BL6NJ_G0017880	Cirbp	80	32.558
MGP_C57BL6NJ_G0025747	Celf2	57	34.211	MGP_C57BL6NJ_G0023550	Pabpc6	51	34.211
MGP_C57BL6NJ_G0025747	Celf2	64	43.210	MGP_C57BL6NJ_G0033826	Elavl1	81	43.210
MGP_C57BL6NJ_G0025747	Celf2	92	53.659	MGP_C57BL6NJ_G0017954	Celf5	93	59.770
MGP_C57BL6NJ_G0025747	Celf2	57	35.714	MGP_C57BL6NJ_G0022203	Pabpc1	51	34.884
MGP_C57BL6NJ_G0025747	Celf2	60	36.364	MGP_C57BL6NJ_G0028476	-	59	36.364
MGP_C57BL6NJ_G0025747	Celf2	77	39.474	MGP_C57BL6NJ_G0035900	Rbms3	75	37.079