EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0026005 (Gene tree)
Gene ID: -
Gene Symbol: Fubp3
Alias: A330051M14Rik|AV006371|FBP3|Marta2
Full Name: far upstream element (FUSE) binding protein 3
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 45815 bases
Position: chr2:30863386-30909200
Accession: 2443699
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0054418	KH_1	PF00013.29	1e-68	1	4
MGP_C57BL6NJ_P0054418	KH_1	PF00013.29	1e-68	2	4
MGP_C57BL6NJ_P0054418	KH_1	PF00013.29	1e-68	3	4
MGP_C57BL6NJ_P0054418	KH_1	PF00013.29	1e-68	4	4
MGP_C57BL6NJ_P0054422	KH_1	PF00013.29	1.1e-68	1	4
MGP_C57BL6NJ_P0054422	KH_1	PF00013.29	1.1e-68	2	4
MGP_C57BL6NJ_P0054422	KH_1	PF00013.29	1.1e-68	3	4
MGP_C57BL6NJ_P0054422	KH_1	PF00013.29	1.1e-68	4	4
MGP_C57BL6NJ_P0054425	KH_1	PF00013.29	7.6e-19	1	1
MGP_C57BL6NJ_P0054421	KH_1	PF00013.29	8.1e-11	1	1
MGP_C57BL6NJ_P0054418	KH_2	PF07650.17	7.8e-21	1	1
MGP_C57BL6NJ_P0054422	KH_2	PF07650.17	8e-21	1	1
MGP_C57BL6NJ_P0054425	KH_2	PF07650.17	1.4e-05	1	1
MGP_C57BL6NJ_P0054426	DUF1897	PF09005.10	4.2e-09	1	2
MGP_C57BL6NJ_P0054426	DUF1897	PF09005.10	4.2e-09	2	2
MGP_C57BL6NJ_P0054427	DUF1897	PF09005.10	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0054418	-	3267	XM_006498126	MGP_C57BL6NJ_P0054418	569 (aa)	XP_006498189	A0A0A6YVV5
MGP_C57BL6NJ_T0054419	-	372	-	MGP_C57BL6NJ_P0054419	97 (aa)	-	-
MGP_C57BL6NJ_T0054427	-	437	-	MGP_C57BL6NJ_P0054427	52 (aa)	-	-
MGP_C57BL6NJ_T0054426	-	842	-	MGP_C57BL6NJ_P0054426	103 (aa)	-	-
MGP_C57BL6NJ_T0054425	-	1073	-	MGP_C57BL6NJ_P0054425	263 (aa)	-	-
MGP_C57BL6NJ_T0054424	-	908	-	MGP_C57BL6NJ_P0054424	191 (aa)	-	-
MGP_C57BL6NJ_T0054423	-	453	-	MGP_C57BL6NJ_P0054423	83 (aa)	-	-
MGP_C57BL6NJ_T0054422	-	3647	-	MGP_C57BL6NJ_P0054422	575 (aa)	-	-
MGP_C57BL6NJ_T0054421	-	425	-	MGP_C57BL6NJ_P0054421	123 (aa)	-	-
MGP_C57BL6NJ_T0054420	-	1909	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0054428	-	2341	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0026005's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0026005's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0026005	Fubp3	58	30.000	MGP_C57BL6NJ_G0023083	Igf2bp2	66	30.000
MGP_C57BL6NJ_G0026005	Fubp3	96	64.324	MGP_C57BL6NJ_G0028402	Fubp1	94	59.208
MGP_C57BL6NJ_G0026005	Fubp3	77	31.973	MGP_C57BL6NJ_G0017785	Pcbp3	85	31.973
MGP_C57BL6NJ_G0026005	Fubp3	95	58.824	MGP_C57BL6NJ_G0024354	Khsrp	84	48.682
MGP_C57BL6NJ_G0026005	Fubp3	88	32.370	MGP_C57BL6NJ_G0031414	Pcbp1	60	31.169
MGP_C57BL6NJ_G0026005	Fubp3	79	31.707	MGP_C57BL6NJ_G0027968	Tdrkh	74	31.707
MGP_C57BL6NJ_G0026005	Fubp3	70	36.000	MGP_C57BL6NJ_G0035725	-	83	36.000