EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0026135 (Gene tree)
Gene ID: -
Gene Symbol: Zeb2
Alias: 9130203F04Rik|D130016B08Rik|SIP1|Sip1|Zfhx1b|Zfx1b|Zfxh1b
Full Name: zinc finger E-box binding homeobox 2
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 140402 bases
Position: chr2:45367130-45507531
Accession: 1344407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0055105	zf-C2H2	PF00096.26	1.8e-24	1	5
MGP_C57BL6NJ_P0055105	zf-C2H2	PF00096.26	1.8e-24	2	5
MGP_C57BL6NJ_P0055105	zf-C2H2	PF00096.26	1.8e-24	3	5
MGP_C57BL6NJ_P0055105	zf-C2H2	PF00096.26	1.8e-24	4	5
MGP_C57BL6NJ_P0055105	zf-C2H2	PF00096.26	1.8e-24	5	5
MGP_C57BL6NJ_P0055107	zf-C2H2	PF00096.26	2.1e-24	1	5
MGP_C57BL6NJ_P0055107	zf-C2H2	PF00096.26	2.1e-24	2	5
MGP_C57BL6NJ_P0055107	zf-C2H2	PF00096.26	2.1e-24	3	5
MGP_C57BL6NJ_P0055107	zf-C2H2	PF00096.26	2.1e-24	4	5
MGP_C57BL6NJ_P0055107	zf-C2H2	PF00096.26	2.1e-24	5	5
MGP_C57BL6NJ_P0055101	zf-C2H2	PF00096.26	2.1e-24	1	5
MGP_C57BL6NJ_P0055101	zf-C2H2	PF00096.26	2.1e-24	2	5
MGP_C57BL6NJ_P0055101	zf-C2H2	PF00096.26	2.1e-24	3	5
MGP_C57BL6NJ_P0055101	zf-C2H2	PF00096.26	2.1e-24	4	5
MGP_C57BL6NJ_P0055101	zf-C2H2	PF00096.26	2.1e-24	5	5
MGP_C57BL6NJ_P0055104	zf-C2H2	PF00096.26	2.1e-24	1	5
MGP_C57BL6NJ_P0055104	zf-C2H2	PF00096.26	2.1e-24	2	5
MGP_C57BL6NJ_P0055104	zf-C2H2	PF00096.26	2.1e-24	3	5
MGP_C57BL6NJ_P0055104	zf-C2H2	PF00096.26	2.1e-24	4	5
MGP_C57BL6NJ_P0055104	zf-C2H2	PF00096.26	2.1e-24	5	5
MGP_C57BL6NJ_P0055106	zf-C2H2	PF00096.26	2.1e-24	1	5
MGP_C57BL6NJ_P0055106	zf-C2H2	PF00096.26	2.1e-24	2	5
MGP_C57BL6NJ_P0055106	zf-C2H2	PF00096.26	2.1e-24	3	5
MGP_C57BL6NJ_P0055106	zf-C2H2	PF00096.26	2.1e-24	4	5
MGP_C57BL6NJ_P0055106	zf-C2H2	PF00096.26	2.1e-24	5	5
MGP_C57BL6NJ_P0055103	zf-C2H2	PF00096.26	2.9e-24	1	5
MGP_C57BL6NJ_P0055103	zf-C2H2	PF00096.26	2.9e-24	2	5
MGP_C57BL6NJ_P0055103	zf-C2H2	PF00096.26	2.9e-24	3	5
MGP_C57BL6NJ_P0055103	zf-C2H2	PF00096.26	2.9e-24	4	5
MGP_C57BL6NJ_P0055103	zf-C2H2	PF00096.26	2.9e-24	5	5
MGP_C57BL6NJ_P0055108	zf-C2H2	PF00096.26	1.2e-17	1	4
MGP_C57BL6NJ_P0055108	zf-C2H2	PF00096.26	1.2e-17	2	4
MGP_C57BL6NJ_P0055108	zf-C2H2	PF00096.26	1.2e-17	3	4
MGP_C57BL6NJ_P0055108	zf-C2H2	PF00096.26	1.2e-17	4	4
MGP_C57BL6NJ_P0055102	zf-C2H2	PF00096.26	1.2e-15	1	3
MGP_C57BL6NJ_P0055102	zf-C2H2	PF00096.26	1.2e-15	2	3
MGP_C57BL6NJ_P0055102	zf-C2H2	PF00096.26	1.2e-15	3	3
MGP_C57BL6NJ_P0055105	zf-met	PF12874.7	1.4e-06	1	1
MGP_C57BL6NJ_P0055107	zf-met	PF12874.7	1.7e-06	1	1
MGP_C57BL6NJ_P0055101	zf-met	PF12874.7	1.7e-06	1	1
MGP_C57BL6NJ_P0055104	zf-met	PF12874.7	1.7e-06	1	1
MGP_C57BL6NJ_P0055106	zf-met	PF12874.7	1.7e-06	1	1
MGP_C57BL6NJ_P0055103	zf-met	PF12874.7	2.3e-06	1	1
MGP_C57BL6NJ_P0055108	zf-met	PF12874.7	5.8e-05	1	2
MGP_C57BL6NJ_P0055108	zf-met	PF12874.7	5.8e-05	2	2
MGP_C57BL6NJ_P0055102	zf-met	PF12874.7	0.00041	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0055121	-	2070	-	MGP_C57BL6NJ_P0055121	37 (aa)	-	-
MGP_C57BL6NJ_T0055120	-	462	-	MGP_C57BL6NJ_P0055120	83 (aa)	-	-
MGP_C57BL6NJ_T0055123	-	2690	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0055122	-	2608	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0055125	-	370	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0055124	-	2989	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0055109	-	868	-	MGP_C57BL6NJ_P0055109	214 (aa)	-	-
MGP_C57BL6NJ_T0055108	-	2236	-	MGP_C57BL6NJ_P0055108	731 (aa)	-	-
MGP_C57BL6NJ_T0055107	-	3913	-	MGP_C57BL6NJ_P0055107	1214 (aa)	-	-
MGP_C57BL6NJ_T0055106	-	4020	-	MGP_C57BL6NJ_P0055106	1215 (aa)	-	-
MGP_C57BL6NJ_T0055105	-	4064	-	MGP_C57BL6NJ_P0055105	1191 (aa)	-	-
MGP_C57BL6NJ_T0055104	-	5624	-	MGP_C57BL6NJ_P0055104	1215 (aa)	-	-
MGP_C57BL6NJ_T0055103	-	5335	-	MGP_C57BL6NJ_P0055103	1259 (aa)	-	-
MGP_C57BL6NJ_T0055102	-	1762	-	MGP_C57BL6NJ_P0055102	220 (aa)	-	-
MGP_C57BL6NJ_T0055101	-	9124	XM_006498042	MGP_C57BL6NJ_P0055101	1215 (aa)	XP_006498105	Q9R0G7
MGP_C57BL6NJ_T0055127	-	3861	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0055126	-	644	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0055128	-	432	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0055118	-	550	-	MGP_C57BL6NJ_P0055118	91 (aa)	-	-
MGP_C57BL6NJ_T0055119	-	577	-	MGP_C57BL6NJ_P0055119	63 (aa)	-	-
MGP_C57BL6NJ_T0055110	-	240	-	MGP_C57BL6NJ_P0055110	79 (aa)	-	-
MGP_C57BL6NJ_T0055111	-	709	-	MGP_C57BL6NJ_P0055111	184 (aa)	-	-
MGP_C57BL6NJ_T0055112	-	453	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0055113	-	631	-	MGP_C57BL6NJ_P0055113	141 (aa)	-	-
MGP_C57BL6NJ_T0055114	-	618	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0055115	-	443	-	MGP_C57BL6NJ_P0055115	113 (aa)	-	-
MGP_C57BL6NJ_T0055116	-	2676	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0055117	-	2908	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0026135's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0026135's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0026135	Zeb2	97	62.150	MGP_C57BL6NJ_G0024534	Zeb1	100	69.340