EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0026151 (Gene tree)
Gene ID: -
Gene Symbol: Arl5a
Alias: 2410015N24Rik|2810410P22Rik|AA408731|AW610751|Arl5|T25534
Full Name: ADP-ribosylation factor-like 5A
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 28521 bases
Position: chr2:53255565-53284085
Accession: 1922673
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0055219	MMR_HSR1	PF01926.23	3.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0055219	-	5238	XM_011239204	MGP_C57BL6NJ_P0055219	179 (aa)	XP_011237506	Q80ZU0
MGP_C57BL6NJ_T0055220	-	452	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0026151's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0026151's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0026151	Arl5a	93	42.771	MGP_C57BL6NJ_G0025163	Arl2	90	42.771
MGP_C57BL6NJ_G0026151	Arl5a	92	38.788	MGP_C57BL6NJ_G0021842	Arl11	94	38.788
MGP_C57BL6NJ_G0026151	Arl5a	93	37.647	MGP_C57BL6NJ_G0023350	Arl6	91	37.647
MGP_C57BL6NJ_G0026151	Arl5a	100	45.556	MGP_C57BL6NJ_G0030945	Arf5	100	45.556
MGP_C57BL6NJ_G0026151	Arl5a	97	38.587	MGP_C57BL6NJ_G0027441	Arfrp1	93	38.938
MGP_C57BL6NJ_G0026151	Arl5a	88	41.463	MGP_C57BL6NJ_G0016684	Arl4c	85	41.463
MGP_C57BL6NJ_G0026151	Arl5a	100	79.888	MGP_C57BL6NJ_G0025781	Arl5b	98	81.437
MGP_C57BL6NJ_G0026151	Arl5a	69	30.597	MGP_C57BL6NJ_G0024393	Rab12	51	30.597
MGP_C57BL6NJ_G0026151	Arl5a	63	33.913	MGP_C57BL6NJ_G0020955	Arl10	55	33.913
MGP_C57BL6NJ_G0026151	Arl5a	99	35.000	MGP_C57BL6NJ_G0027713	Arl14	92	35.000
MGP_C57BL6NJ_G0026151	Arl5a	99	49.438	MGP_C57BL6NJ_G0022719	Arf3	98	49.438
MGP_C57BL6NJ_G0026151	Arl5a	87	50.641	MGP_C57BL6NJ_G0018030	Arl1	99	53.285
MGP_C57BL6NJ_G0026151	Arl5a	96	42.197	MGP_C57BL6NJ_G0025625	Arl3	95	42.197
MGP_C57BL6NJ_G0026151	Arl5a	99	49.438	MGP_C57BL6NJ_G0018785	Arf1	98	49.438
MGP_C57BL6NJ_G0026151	Arl5a	89	41.566	MGP_C57BL6NJ_G0020090	Arl4a	83	41.566
MGP_C57BL6NJ_G0026151	Arl5a	91	38.095	MGP_C57BL6NJ_G0019601	Arl4d	84	38.095
MGP_C57BL6NJ_G0026151	Arl5a	99	49.438	MGP_C57BL6NJ_G0019663	Arf2	98	49.438
MGP_C57BL6NJ_G0026151	Arl5a	98	72.000	MGP_C57BL6NJ_G0019440	Arl5c	98	72.000