EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0026275 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpa3
Alias: 2410013L13Rik|2610209F03Rik|2610510D13Rik|Hnrpa3|hnRNPA3
Full Name: heterogeneous nuclear ribonucleoprotein A3
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 12264 bases
Position: chr2:78281440-78293703
Accession: 1917171
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0055852	RRM_1	PF00076.22	1.2e-26	1	2
MGP_C57BL6NJ_P0055852	RRM_1	PF00076.22	1.2e-26	2	2
MGP_C57BL6NJ_P0055854	RRM_1	PF00076.22	1.2e-26	1	2
MGP_C57BL6NJ_P0055854	RRM_1	PF00076.22	1.2e-26	2	2
MGP_C57BL6NJ_P0055855	RRM_1	PF00076.22	1.5e-26	1	2
MGP_C57BL6NJ_P0055855	RRM_1	PF00076.22	1.5e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0055851	-	4810	XM_011239516	MGP_C57BL6NJ_P0055851	287 (aa)	XP_011237818	Q8BG05
MGP_C57BL6NJ_T0055853	-	596	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0055852	-	4489	-	MGP_C57BL6NJ_P0055852	357 (aa)	-	-
MGP_C57BL6NJ_T0055855	-	1140	-	MGP_C57BL6NJ_P0055855	379 (aa)	-	-
MGP_C57BL6NJ_T0055854	-	1074	-	MGP_C57BL6NJ_P0055854	357 (aa)	-	-
MGP_C57BL6NJ_T0055856	-	753	-	MGP_C57BL6NJ_P0055856	194 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0026275's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0026275's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0026275	Hnrnpa3	59	70.792	MGP_C57BL6NJ_G0031170	Hnrnpa2b1	59	74.725
MGP_C57BL6NJ_G0026275	Hnrnpa3	56	34.783	MGP_C57BL6NJ_G0017886	Dazap1	100	35.673
MGP_C57BL6NJ_G0026275	Hnrnpa3	60	41.748	MGP_C57BL6NJ_G0030211	Hnrnpd	95	45.370
MGP_C57BL6NJ_G0026275	Hnrnpa3	79	32.237	MGP_C57BL6NJ_G0030213	Hnrnpdl	55	37.059
MGP_C57BL6NJ_G0026275	Hnrnpa3	70	36.364	MGP_C57BL6NJ_G0030399	Msi1	59	37.500
MGP_C57BL6NJ_G0026275	Hnrnpa3	52	45.872	MGP_C57BL6NJ_G0019317	Msi2	88	47.525