EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0026293 (Gene tree)
Gene ID: -
Gene Symbol: Cwc22
Alias: AA684037|AI173004|AL022752|B230213M24|BC003993|Ncm|mKIAA1604
Full Name: CWC22 spliceosome-associated protein
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 68557 bases
Position: chr2:80646532-80715088
Accession: 2136773
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0055943	MA3	PF02847.17	1.2e-23	1	1
MGP_C57BL6NJ_P0055948	MA3	PF02847.17	1.8e-23	1	1
MGP_C57BL6NJ_P0055947	MA3	PF02847.17	1.8e-23	1	1
MGP_C57BL6NJ_P0055944	MA3	PF02847.17	1.8e-23	1	1
MGP_C57BL6NJ_P0055945	MA3	PF02847.17	1.8e-23	1	1
MGP_C57BL6NJ_P0055943	MIF4G	PF02854.19	1.9e-10	1	1
MGP_C57BL6NJ_P0055948	MIF4G	PF02854.19	2.7e-10	1	1
MGP_C57BL6NJ_P0055947	MIF4G	PF02854.19	2.7e-10	1	1
MGP_C57BL6NJ_P0055944	MIF4G	PF02854.19	2.8e-10	1	1
MGP_C57BL6NJ_P0055945	MIF4G	PF02854.19	2.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0055943	-	2603	XM_006500433	MGP_C57BL6NJ_P0055943	723 (aa)	XP_006500496	Q8C5N3
MGP_C57BL6NJ_T0055947	-	3090	-	MGP_C57BL6NJ_P0055947	903 (aa)	-	-
MGP_C57BL6NJ_T0055946	-	2205	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0055945	-	3388	-	MGP_C57BL6NJ_P0055945	908 (aa)	-	-
MGP_C57BL6NJ_T0055944	-	3471	-	MGP_C57BL6NJ_P0055944	908 (aa)	-	-
MGP_C57BL6NJ_T0055954	-	409	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0055955	-	511	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0055949	-	1066	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0055948	-	3255	-	MGP_C57BL6NJ_P0055948	902 (aa)	-	-
MGP_C57BL6NJ_T0055950	-	2094	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0055951	-	1877	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0055952	-	678	-	MGP_C57BL6NJ_P0055952	139 (aa)	-	-
MGP_C57BL6NJ_T0055953	-	533	-	MGP_C57BL6NJ_P0055953	109 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0026293's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0026293's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0026293	Cwc22	92	94.502	MGP_C57BL6NJ_G0026314	Gm13693	99	94.324