EuRBPDB

Description

Ensembl ID: MGP_C57BL6NJ_G0026628 (Gene tree)
Gene ID: -
Gene Symbol: Caprin1
Alias: AL022980|Caprin-1|Gpiap|Gpiap1|Gpip137|M11s1|MMGPIP137|Mmgpip137|P137|RNG105|Rng105|caprin-1|rng105
Full Name: cell cycle associated protein 1
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 42872 bases
Position: chr2:109293375-109336246
Accession: 1858234
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0056893	Caprin-1_C	PF12287.8	1.8e-136	1	1
MGP_C57BL6NJ_P0056894	Caprin-1_C	PF12287.8	1.8e-136	1	1
MGP_C57BL6NJ_P0056895	Caprin-1_C	PF12287.8	3.3e-90	1	1
MGP_C57BL6NJ_P0056900	Caprin-1_C	PF12287.8	2.8e-25	1	1
MGP_C57BL6NJ_P0056896	Caprin-1_C	PF12287.8	3.5e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0056906	-	391	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0056907	-	626	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0056894	-	4069	-	MGP_C57BL6NJ_P0056894	707 (aa)	-	-
MGP_C57BL6NJ_T0056895	-	1923	-	MGP_C57BL6NJ_P0056895	213 (aa)	-	-
MGP_C57BL6NJ_T0056896	-	856	-	MGP_C57BL6NJ_P0056896	93 (aa)	-	-
MGP_C57BL6NJ_T0056897	-	816	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0056893	-	6169	XM_006499902	MGP_C57BL6NJ_P0056893	707 (aa)	XP_006499965	Q60865
MGP_C57BL6NJ_T0056902	-	479	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0056903	-	879	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0056900	-	760	-	MGP_C57BL6NJ_P0056900	253 (aa)	-	-
MGP_C57BL6NJ_T0056901	-	570	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0056898	-	937	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0056899	-	809	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0056904	-	555	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0056905	-	828	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0026628	Caprin1	89	44.275	MGP_C57BL6NJ_G0031949	Caprin2	91	38.415