EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0026874 (Gene tree)
Gene ID: -
Gene Symbol: Ciao1
Alias: AW210570|Wdr39
Full Name: cytosolic iron-sulfur protein assembly 1
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 7162 bases
Position: chr2:134613349-134620510
Accession: 1346998
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0057919	eIF2A	PF08662.11	0.0003	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0057917	-	3358	-	MGP_C57BL6NJ_P0057917	339 (aa)	-	Q99KN2
MGP_C57BL6NJ_T0057920	-	409	-	MGP_C57BL6NJ_P0057920	51 (aa)	-	-
MGP_C57BL6NJ_T0057918	-	581	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0057919	-	531	-	MGP_C57BL6NJ_P0057919	176 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0026874's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0026874's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0026874	Ciao1	84	32.331	MGP_C57BL6NJ_G0023724	Tbl3	55	30.714
MGP_C57BL6NJ_G0026874	Ciao1	85	34.058	MGP_C57BL6NJ_G0023192	Wdr5b	85	34.058
MGP_C57BL6NJ_G0026874	Ciao1	85	36.364	MGP_C57BL6NJ_G0035719	Poc1a	80	36.364
MGP_C57BL6NJ_G0026874	Ciao1	91	36.735	MGP_C57BL6NJ_G0025932	Wdr5	90	36.735