EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0027031 (Gene tree)
Gene ID: -
Gene Symbol: Gzf1
Alias: 8430437G08Rik|Zfp336|mGZF1
Full Name: GDNF-inducible zinc finger protein 1
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 16067 bases
Position: chr2:157490072-157506138
Accession: 1921783
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0058586	zf-C2H2	PF00096.26	3.1e-34	1	6
MGP_C57BL6NJ_P0058586	zf-C2H2	PF00096.26	3.1e-34	2	6
MGP_C57BL6NJ_P0058586	zf-C2H2	PF00096.26	3.1e-34	3	6
MGP_C57BL6NJ_P0058586	zf-C2H2	PF00096.26	3.1e-34	4	6
MGP_C57BL6NJ_P0058586	zf-C2H2	PF00096.26	3.1e-34	5	6
MGP_C57BL6NJ_P0058586	zf-C2H2	PF00096.26	3.1e-34	6	6
MGP_C57BL6NJ_P0058586	zf-met	PF12874.7	6.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0058586	-	4232	XM_006500304	MGP_C57BL6NJ_P0058586	706 (aa)	XP_006500367	Q4VBD9
MGP_C57BL6NJ_T0058587	-	701	-	MGP_C57BL6NJ_P0058587	146 (aa)	-	-
MGP_C57BL6NJ_T0058588	-	734	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0027031's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0027031's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0027031	Gzf1	51	46.193	MGP_C57BL6NJ_G0027540	Mynn	64	37.415
MGP_C57BL6NJ_G0027031	Gzf1	84	34.286	MGP_C57BL6NJ_G0016956	Zbtb41	54	34.286
MGP_C57BL6NJ_G0027031	Gzf1	83	39.568	MGP_C57BL6NJ_G0029473	Zbtb17	78	39.568
MGP_C57BL6NJ_G0027031	Gzf1	60	41.176	MGP_C57BL6NJ_G0021105	Zfp748	82	41.176
MGP_C57BL6NJ_G0027031	Gzf1	66	44.103	MGP_C57BL6NJ_G0029938	Zbtb49	62	46.479
MGP_C57BL6NJ_G0027031	Gzf1	64	37.349	MGP_C57BL6NJ_G0035948	Zfp651	51	37.349