EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0027315 (Gene tree)
Gene ID: -
Gene Symbol: Zfp334
Alias: D2Ertd535e
Full Name: zinc finger protein 334
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 14473 bases
Position: chr2:175875756-175890228
Accession: 2388656
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0059727	zf-C2H2	PF00096.26	2.1e-65	1	12
MGP_C57BL6NJ_P0059727	zf-C2H2	PF00096.26	2.1e-65	2	12
MGP_C57BL6NJ_P0059727	zf-C2H2	PF00096.26	2.1e-65	3	12
MGP_C57BL6NJ_P0059727	zf-C2H2	PF00096.26	2.1e-65	4	12
MGP_C57BL6NJ_P0059727	zf-C2H2	PF00096.26	2.1e-65	5	12
MGP_C57BL6NJ_P0059727	zf-C2H2	PF00096.26	2.1e-65	6	12
MGP_C57BL6NJ_P0059727	zf-C2H2	PF00096.26	2.1e-65	7	12
MGP_C57BL6NJ_P0059727	zf-C2H2	PF00096.26	2.1e-65	8	12
MGP_C57BL6NJ_P0059727	zf-C2H2	PF00096.26	2.1e-65	9	12
MGP_C57BL6NJ_P0059727	zf-C2H2	PF00096.26	2.1e-65	10	12
MGP_C57BL6NJ_P0059727	zf-C2H2	PF00096.26	2.1e-65	11	12
MGP_C57BL6NJ_P0059727	zf-C2H2	PF00096.26	2.1e-65	12	12
MGP_C57BL6NJ_P0059727	zf-met	PF12874.7	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0059727	-	8099	XM_006499377	MGP_C57BL6NJ_P0059727	679 (aa)	XP_006499440	A2A4U6

Gene Model

Click here to download MGP_C57BL6NJ_G0027315's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0027315's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0027315	Zfp334	67	49.057	MGP_C57BL6NJ_G0032301	Zfp574	93	35.422
MGP_C57BL6NJ_G0027315	Zfp334	99	41.935	MGP_C57BL6NJ_G0018791	Zfp867	97	45.455
MGP_C57BL6NJ_G0027315	Zfp334	66	35.088	MGP_C57BL6NJ_G0034479	Zfp319	91	34.307
MGP_C57BL6NJ_G0027315	Zfp334	67	47.222	MGP_C57BL6NJ_G0018741	Zfp672	99	42.500
MGP_C57BL6NJ_G0027315	Zfp334	68	44.545	MGP_C57BL6NJ_G0025014	Zfp236	68	44.545
MGP_C57BL6NJ_G0027315	Zfp334	100	50.400	MGP_C57BL6NJ_G0021087	Rslcan18	81	50.400
MGP_C57BL6NJ_G0027315	Zfp334	99	46.528	MGP_C57BL6NJ_G0021088	Zfp759	100	47.410
MGP_C57BL6NJ_G0027315	Zfp334	66	44.882	MGP_C57BL6NJ_G0030303	4930522L14Rik	97	44.141
MGP_C57BL6NJ_G0027315	Zfp334	99	41.827	MGP_C57BL6NJ_G0034971	Zfp872	99	39.823
MGP_C57BL6NJ_G0027315	Zfp334	66	40.000	MGP_C57BL6NJ_G0032020	-	71	34.911
MGP_C57BL6NJ_G0027315	Zfp334	99	53.469	MGP_C57BL6NJ_G0026884	Zfp661	96	53.469
MGP_C57BL6NJ_G0027315	Zfp334	99	47.101	MGP_C57BL6NJ_G0018653	Zfp354a	99	45.823
MGP_C57BL6NJ_G0027315	Zfp334	99	50.427	MGP_C57BL6NJ_G0034637	Zfp1	100	42.857
MGP_C57BL6NJ_G0027315	Zfp334	99	44.921	MGP_C57BL6NJ_G0032591	Zfp715	95	44.921
MGP_C57BL6NJ_G0027315	Zfp334	99	37.049	MGP_C57BL6NJ_G0032270	Zfp61	97	40.343
MGP_C57BL6NJ_G0027315	Zfp334	99	41.809	MGP_C57BL6NJ_G0032271	Zfp94	96	41.809
MGP_C57BL6NJ_G0027315	Zfp334	67	40.000	MGP_C57BL6NJ_G0023666	Zscan10	76	41.339
MGP_C57BL6NJ_G0027315	Zfp334	68	41.026	MGP_C57BL6NJ_G0016956	Zbtb41	59	34.343
MGP_C57BL6NJ_G0027315	Zfp334	71	39.286	MGP_C57BL6NJ_G0032019	Zfp865	80	37.946
MGP_C57BL6NJ_G0027315	Zfp334	69	46.429	MGP_C57BL6NJ_G0032011	Zfp628	61	40.323
MGP_C57BL6NJ_G0027315	Zfp334	99	44.615	MGP_C57BL6NJ_G0018644	Zfp454	98	43.782
MGP_C57BL6NJ_G0027315	Zfp334	75	51.716	MGP_C57BL6NJ_G0032439	Zfp420	99	52.489
MGP_C57BL6NJ_G0027315	Zfp334	65	53.103	MGP_C57BL6NJ_G0020666	Zkscan4	57	53.103
MGP_C57BL6NJ_G0027315	Zfp334	100	53.110	MGP_C57BL6NJ_G0032267	Zfp111	99	53.110
MGP_C57BL6NJ_G0027315	Zfp334	99	43.787	MGP_C57BL6NJ_G0032266	Zfp235	100	47.291
MGP_C57BL6NJ_G0027315	Zfp334	99	44.051	MGP_C57BL6NJ_G0032265	Zfp112	99	44.051
MGP_C57BL6NJ_G0027315	Zfp334	67	40.000	MGP_C57BL6NJ_G0031270	Prdm5	93	45.185
MGP_C57BL6NJ_G0027315	Zfp334	71	47.436	MGP_C57BL6NJ_G0029938	Zbtb49	94	45.833
MGP_C57BL6NJ_G0027315	Zfp334	67	54.545	MGP_C57BL6NJ_G0031616	Zfp637	83	49.215
MGP_C57BL6NJ_G0027315	Zfp334	66	39.167	MGP_C57BL6NJ_G0027353	Zfp64	70	32.688
MGP_C57BL6NJ_G0027315	Zfp334	99	44.118	MGP_C57BL6NJ_G0023659	Zfp945	99	44.656
MGP_C57BL6NJ_G0027315	Zfp334	78	38.068	MGP_C57BL6NJ_G0033529	Zfp747	75	38.068
MGP_C57BL6NJ_G0027315	Zfp334	99	44.000	MGP_C57BL6NJ_G0033528	E430018J23Rik	87	44.000
MGP_C57BL6NJ_G0027315	Zfp334	68	39.355	MGP_C57BL6NJ_G0019380	Zfp652	50	39.355
MGP_C57BL6NJ_G0027315	Zfp334	99	40.330	MGP_C57BL6NJ_G0034262	Zfp882	99	40.330
MGP_C57BL6NJ_G0027315	Zfp334	99	46.712	MGP_C57BL6NJ_G0034908	Zfp26	89	46.712
MGP_C57BL6NJ_G0027315	Zfp334	65	39.216	MGP_C57BL6NJ_G0029473	Zbtb17	56	35.083
MGP_C57BL6NJ_G0027315	Zfp334	62	47.651	MGP_C57BL6NJ_G0030274	Gfi1	100	47.863
MGP_C57BL6NJ_G0027315	Zfp334	65	46.154	MGP_C57BL6NJ_G0034261	Zfp709	88	44.076
MGP_C57BL6NJ_G0027315	Zfp334	66	50.943	MGP_C57BL6NJ_G0033526	Zfp768	52	44.156
MGP_C57BL6NJ_G0027315	Zfp334	70	38.528	MGP_C57BL6NJ_G0031136	Repin1	95	36.293
MGP_C57BL6NJ_G0027315	Zfp334	99	43.953	MGP_C57BL6NJ_G0022420	Zfp251	94	42.359
MGP_C57BL6NJ_G0027315	Zfp334	85	55.556	MGP_C57BL6NJ_G0021105	Zfp748	99	55.556
MGP_C57BL6NJ_G0027315	Zfp334	99	49.434	MGP_C57BL6NJ_G0023637	Zfp51	95	49.434
MGP_C57BL6NJ_G0027315	Zfp334	99	37.372	MGP_C57BL6NJ_G0023635	Zfp677	94	37.703