EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0027338 (Gene tree)
Gene ID: -
Gene Symbol: Snai1
Alias: Sna|Sna1|Snail|Snail1
Full Name: snail family zinc finger 1
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 6121 bases
Position: chr2:178331128-178337248
Accession: 98330
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0059858	zf-C2H2	PF00096.26	1.4e-17	1	2
MGP_C57BL6NJ_P0059858	zf-C2H2	PF00096.26	1.4e-17	2	2
MGP_C57BL6NJ_P0059858	zf-met	PF12874.7	9.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0059858	-	1621	-	MGP_C57BL6NJ_P0059858	264 (aa)	-	Q02085

Gene Model

Click here to download MGP_C57BL6NJ_G0027338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0027338's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0027338	Snai1	99	41.333	MGP_C57BL6NJ_G0034720	Snai3	100	40.667
MGP_C57BL6NJ_G0027338	Snai1	98	53.650	MGP_C57BL6NJ_G0022963	Snai2	99	52.708
MGP_C57BL6NJ_G0027338	Snai1	51	37.500	MGP_C57BL6NJ_G0034410	Zfp423	58	37.895