EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0027375 (Gene tree)
Gene ID: -
Gene Symbol: Rbm38
Alias: Rnpc1|Seb4|Seb4l
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 12830 bases
Position: chr2:184417928-184430757
Accession: 1889294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0059991	RRM_1	PF00076.22	1.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0059994	-	1527	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0059990	-	2281	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0059991	-	714	-	MGP_C57BL6NJ_P0059991	237 (aa)	-	-
MGP_C57BL6NJ_T0059992	-	620	-	MGP_C57BL6NJ_P0059992	107 (aa)	-	-
MGP_C57BL6NJ_T0059993	-	440	-	MGP_C57BL6NJ_P0059993	125 (aa)	-	-
MGP_C57BL6NJ_T0059989	-	936	XM_006499923	MGP_C57BL6NJ_P0059989	78 (aa)	XP_006499986	Q62176

Gene Model

Click here to download MGP_C57BL6NJ_G0027375's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0027375's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0027375	Rbm38	74	38.043	MGP_C57BL6NJ_G0017880	Cirbp	78	40.476
MGP_C57BL6NJ_G0027375	Rbm38	77	35.484	MGP_C57BL6NJ_G0017886	Dazap1	86	35.802
MGP_C57BL6NJ_G0027375	Rbm38	66	46.809	MGP_C57BL6NJ_G0030399	Msi1	61	51.064
MGP_C57BL6NJ_G0027375	Rbm38	52	42.857	MGP_C57BL6NJ_G0030211	Hnrnpd	51	36.364
MGP_C57BL6NJ_G0027375	Rbm38	70	38.095	MGP_C57BL6NJ_G0019317	Msi2	86	33.562
MGP_C57BL6NJ_G0027375	Rbm38	63	91.837	MGP_C57BL6NJ_G0020895	Rbm24	100	68.067